Arvicanthis niloticus (African grass rat): 117706733
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Entry
117706733 CDS
T08817
Symbol
Notch2
Name
(RefSeq) neurogenic locus notch homolog protein 2
KO
K20994
Notch 2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu01522
Endocrine resistance
anu04330
Notch signaling pathway
anu04658
Th1 and Th2 cell differentiation
anu04919
Thyroid hormone signaling pathway
anu05165
Human papillomavirus infection
anu05200
Pathways in cancer
anu05206
MicroRNAs in cancer
anu05207
Chemical carcinogenesis - receptor activation
anu05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117706733 (Notch2)
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
117706733 (Notch2)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
117706733 (Notch2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117706733 (Notch2)
05206 MicroRNAs in cancer
117706733 (Notch2)
05207 Chemical carcinogenesis - receptor activation
117706733 (Notch2)
09162 Cancer: specific types
05224 Breast cancer
117706733 (Notch2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
117706733 (Notch2)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
117706733 (Notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
EGF_Teneurin
FXa_inhibition
EGF_DL_JAG
cEGF
Motif
Other DBs
NCBI-GeneID:
117706733
NCBI-ProteinID:
XP_034355725
LinkDB
All DBs
Position
4:77415366..77549676
Genome browser
AA seq
2471 aa
AA seq
DB search
MPALRSAALRALLWFWLCGAGPAHALQCRGGQEPCVNEGTCVTYHNGTGYCRCPEGFLGE
YCQHRDPCEKNRCQNGGTCVTQAMLGKATCRCAPGFTGEECQYSTSHPCFVSRPCQNGGT
CHMLSRDTYECTCQVGFTGKQCQWTDACLSHPCENGSTCTSVASQFSCRCPAGITGQKCE
ADINECDIPGRCQHGGTCLNLPGSYRCQCPQGFTGQHCDSPYVPCAPSPCVNGGTCRQTG
DFTFECNCLPGFEGSTCERNIDDCPNHKCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVD
ECLLQPNACQNGGTCTNRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASF
SCLCPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECA
MANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTC
LCMPGFKGVHCELEVNECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTP
CLNGAKCIDHPNGYECQCATGFTGMLCDENIDNCDPDPCHHGQCQDGIDSYTCICNPGYM
GAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPGTSGLNCEINFDDCASNPCMHGACV
DGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINDVNGFRCICPEGPHHPSCYSQ
VNECLSNPCIHGNCTGGLSGYKCLCDAGWVGVNCEVDKNECLSNPCQNEGTCNNLVNGYR
CTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCMLPYTGKNCQTVLAPCSPN
PCENAGVCKEAPNFESFTCLCAPGWQGHRCTVDIDECVSKPCMNHGICHNTQGSYMCECP
PGFSGMDCEEDINDCLANPCQNGGSCVDKVNTFSCQCLPGFIGDKCQTDMNECLSEPCKN
GGTCSDYVNSYTCTCPAGFHGVHCENNIDECTESSCFNGGTCVDGINSFSCLCPVGFTGP
FCLHDINECSSNPCLNGGTCVDGLGTYRCICPLGYTGKNCQTLVNLCSRSPCKNKGTCVQ
EKARPHCLCPPGWDGAYCDVLNVSCKAAALQKGVPVEHLCQHSGVCINAGNTHHCQCPLG
YTGSYCEEQLDECASNPCQHGATCNDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGG
TCIDLVNHFKCSCPPGTRGLLCEENIDDCAGGPHCLNDGQCVDRIGGYSCRCLPGFAGER
CEGDINECLSNPCSSEGSLDCIQLKNNYQCVCRSAFTGRHCETFLDVCPQKPCLNGGTCA
VASNMPDGFICRCPPGFSGARCQSSCGQVKCRRGEQCVHTASGPRCFCPNPKDCESGCAS
NPCQHGGTCYPQRQPPYYSCRCSPPFWGSHCELYTAPTSTPPATCQSQYCADKARDGICD
EACNSHACQWDGGDCSLTMEDPWANCTSSLRCWEYINNQCDELCNTAECLFDNFECQRNS
KTCKYDKYCADHFKDNHCDQGCNSEECGWDGLDCAADQPENLAEGTLVIVVLLPPEQLLQ
DSRSFLRALGTLLHTNLRIKQDSQGALMVYPYYGEKSAPMKKQNMARRSLPDEPEQEMIG
SKVFLEIDNRQCVQDSDQCFKNTDAAAALLASHAIQGTLSYPLVSVVSELDVPGSAPLLY
LLAVAVVIILFIILLGVIMAKRKRKHGFLWLPEGFTLRRDSSNHKRREPVGQDAVGLKNL
SVQVSEANLIGSGTSEHWVDDEGPQPKKAKAEDEALLPEDDPIDRRPWTQQHLEAADIRR
TPSLALTPPQAEQEVAVLDVNVRGPDGCTPLMLASLRGGSSDLSDEDEDAEDSSANIITD
LVYQGASLQAQTDRTGEMALHLAARYSRADAAKRLLDAGADANAQDNMGRCPLHAAVAAD
AQGVFQILIRNRVTDLDARMNDGTTPLILAARLAVEGMVAELINCQADVNAVDDHGKSAL
HWAAAVNNVEATLLLLKNGANRDMQDNKEETPLFLAAREGSYEAAKILLDHFANRDITDH
MDRLPRDVARDRMHHDIVRLLDEYNVTPSPPGTVLTSALSPVLCGPNRPFLSLKHTPMGK
KARRPNAKSTMPTSLPNLAKEAKDVKGSRRKKCLNEKVQLSESSVTLSPVDSLESPHTYV
SDATSSPMITSPGVLQASPTPLLAAAAPAAPVHAQHALSFSNLHEMQPLAPGASTVLPSV
SQLLSHHHIVPPGSGSAGSLGRLHPVPVPADWMNRVEMNETQYNEMFGMVLAPAEGAHPG
IAAPQGRPPEGKHISTQREPLPPIVTFQLIPKGSIAQAAGAPQTQSSCPPAVAGPLPSMY
QIPEMARLPSVAFPPTMMPQQEGQVAQTIVPTYHPFPASVGKYPTPPSQHSYASSNAAER
TPSHGGHLQGEHPYLTPSPESPDQWSSSSPHSASDWSDVTTSPTPGGGGGGQRGPGTHMS
EPPNSNMQVYA
NT seq
7416 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctctgcgttcagccgcgctgcgggcgctgctgtggttctggctgtgcggcgcg
ggccccgcgcacgctttgcagtgtcgaggtggtcaagagccctgtgtaaatgaagggacg
tgtgttacctaccacaatggcacaggctactgccgatgtccagagggcttcttgggagaa
tattgtcaacatcgagacccctgtgagaaaaaccgttgtcagaatggtggtacttgtgtg
acacaggccatgttggggaaagccacctgccgatgtgctccagggttcactggagaggaa
tgccaatactcgacctctcacccctgctttgtgtcccgcccctgtcagaatgggggcacc
tgccacatgctcagccgggacacctatgagtgcacctgccaagtcggcttcacagggaaa
cagtgtcagtggacagatgcctgtctgtctcatccctgcgaaaatggaagcacctgtacc
tctgtggccagccagttctcctgcagatgtcctgcaggcatcacaggccagaagtgtgaa
gctgatatcaatgagtgtgacattccaggacgctgccaacatggtggcacctgcctcaac
cttcctggttcttacagatgccagtgcccccagggcttcacgggccagcactgtgatagc
ccttatgtgccctgtgcaccctcgccctgtgtcaatggaggtacctgccgtcagactggt
gacttcacttttgaatgcaactgcctgccaggtttcgaaggcagcacctgtgagcggaat
atcgatgactgccctaaccacaagtgtcagaatggaggggtctgtgtggatggtgtcaat
acttacaactgccgctgcccccctcagtggaccgggcagttctgcacagaagatgtggat
gagtgtctgctacagcccaatgcttgtcagaatggaggcacctgcaccaaccgtaacgga
ggctacggctgcgtgtgtgtgaacggctggagcggggatgactgcagcgagaacatcgat
gactgtgcctttgcctcttgcacaccagggtccacctgcattgaccgtgtggcctccttc
tcctgcctgtgtccggagggaaaggcaggtctcctttgtcatctggatgatgcctgtatc
agcaacccttgtcacaagggggcgctgtgtgataccaaccccctgaatgggcagtacatt
tgcacctgcccacagggctacaagggcgctgactgcacagaagacgtggatgagtgtgct
atggccaacagtaacccttgtgagcatgcaggaaagtgtgtgaacacagatggtgccttc
cactgtgagtgtctgaagggatacgcagggcctcgctgtgagatggacatcaatgagtgt
cattcagacccctgccagaacgatgccacctgcctggataagatcggaggtttcacctgt
ctgtgcatgccaggtttcaaaggtgtgcattgtgaactggaggtgaatgaatgccagagc
aacccgtgtgtaaacaatgggcagtgtgtggacaaagtcaatcgtttccagtgtctgtgt
ccccctggcttcacaggacccgtgtgtcagattgacattgatgactgctccagcactccc
tgcctgaacggggccaagtgcatcgaccacccgaacggctatgagtgccagtgtgccaca
ggtttcactggcatgttgtgtgacgagaacatcgacaactgtgacccagatccttgccac
catggtcagtgccaggatgggattgactcctacacctgcatctgcaaccctgggtacatg
ggagccatctgtagtgaccagattgacgaatgctacagcagcccttgcttgaacgatggg
cgctgcattgacctggtgaatggctaccagtgcaactgccaaccgggcacatcaggtctt
aattgtgaaattaattttgatgactgtgccagcaacccttgtatgcatggagcctgtgtg
gatggcatcaatcgttacagttgcgtgtgctctccgggcttcacagggcagaggtgcaac
attgacattgacgagtgtgcctccaacccctgtcgcaagggtgcgacgtgcatcaacgat
gtgaatggtttccggtgtatatgccccgagggaccacatcatcccagctgctactcccag
gtgaacgagtgcttgagcaatccctgcatccacggaaactgtacgggaggtctcagtggc
tataaatgcctctgcgatgcaggctgggttggtgtcaactgcgaagtggacaaaaatgag
tgtctttctaacccatgccagaatgaaggaacctgtaataacctggtgaatggctacagg
tgtacatgcaagaaagggttcaaaggctacaactgccaggtgaatatagacgagtgtgcc
tcaaacccgtgtctgaaccaaggaacctgctttgatgacattagcggctacacttgccac
tgcatgttgccttacacaggcaagaattgtcaaacagtgttggctccctgttccccaaac
ccatgtgagaatgctggtgtttgtaaagaggcacccaattttgagagcttcacctgcttg
tgtgctcctggctggcaaggtcaccgatgtacagttgacattgatgagtgtgtctccaag
ccgtgtatgaaccatggcatctgccataatactcagggcagctacatgtgtgagtgtcct
cctggcttcagtggtatggactgtgaggaggacatcaatgattgcctcgccaacccctgc
cagaacggaggctcctgtgtggacaaagtgaataccttctcctgccagtgccttcccggc
ttcataggggataagtgccagacagacatgaatgagtgtctgagcgagccctgcaagaat
gggggcacctgctctgactatgtcaacagttacacctgcacatgccctgcaggcttccat
ggagtccactgtgaaaacaacattgacgagtgcactgagagctcctgcttcaacggcggc
acgtgtgtcgatggaatcaactctttctcttgcttgtgccccgtgggtttcactgggccc
ttctgcctccatgatatcaatgagtgcagctctaacccatgcctgaatggggggacgtgt
gtcgatggcctgggtacctaccgatgcatctgtcccttgggctacaccgggaaaaactgt
cagaccctggtgaacctctgcagtcgctctccatgtaaaaacaaaggaacttgtgttcag
gaaaaggcaaggccccattgcttgtgtccacctggatgggatggtgcttactgtgatgtg
ctcaacgtgtcctgtaaggcggcagccttgcagaaaggagtacctgttgaacacttgtgc
cagcactcaggtgtctgtatcaatgctggcaacacccatcactgccagtgccccctgggc
tacacagggagctactgtgaggagcagcttgacgagtgtgcatccaatccgtgccagcac
ggtgccacctgcaatgacttcatcggagggtacagatgtgagtgtgttccagggtatcag
ggtgtcaactgtgagtatgaagtggatgagtgccagaaccagccctgccagaacggaggc
acctgcatcgaccttgtgaaccacttcaagtgctcctgcccgccgggcactcggggcctg
ctttgtgaagaaaatattgatgactgtgctgggggcccccactgccttaatgatggccag
tgcgtggaccggattggaggctacagttgtcgctgtttacctggctttgctggggagcgg
tgtgagggggacatcaatgaatgcctgtccaacccttgtagctccgagggcagcctagac
tgcattcagctcaaaaataactaccagtgtgtctgccgcagtgccttcacaggccgtcac
tgtgaaaccttcctggatgtgtgtccccagaagccttgcctgaacggagggacttgtgct
gtggctagcaacatgcctgatggcttcatttgtcgttgtcccccagggttctccggggca
agatgccagagcagctgtggccaagtgaagtgcaggagaggggagcagtgtgtgcacacc
gcctccgggccccgctgcttctgcccgaaccccaaggactgcgagtcaggctgcgccagt
aacccctgccagcatggaggcacctgctatcctcagcgccaacctccttattactcttgc
cgctgctctccgccattctggggcagccactgtgagctctacacagcccccaccagcacc
cctcctgctacctgtcagagtcagtactgtgctgacaaggctcgggacggcatctgtgat
gaggcctgtaacagtcacgcctgccagtgggatggaggtgactgctccctcactatggag
gacccctgggccaactgcacctcctcgcttcgctgctgggagtacatcaacaaccagtgt
gatgaactgtgtaacactgcagagtgcctgtttgacaactttgaatgccagaggaatagc
aagacctgcaagtatgacaaatactgtgcagaccacttcaaagacaatcactgtgatcag
ggatgcaacagcgaggagtgtggctgggatgggctggactgtgctgcggaccagcctgag
aacctggcggagggcaccctggtcattgtggtgctcctgccccctgaacagctgctgcag
gattctcgaagcttcttgcgggccctgggcaccctgcttcacaccaacttacgcattaaa
caagactctcagggcgccctcatggtgtacccctactatggggagaagtcagctcccatg
aagaagcagaacatggcacgcaggtctcttcctgatgagccggagcaggagatgataggc
tctaaggtatttctggaaattgacaaccgacagtgtgttcaagattcagaccagtgcttc
aagaacaccgatgctgcagctgctctcttggcttctcatgccatccaagggaccttgtcc
taccctctggtgtctgttgtcagtgaattggatgttccaggaagcgctccgcttctctat
ctgcttgcggttgctgtcgtcattatcctgttcatcatcctgctgggggtcatcatggca
aaacgaaagcgcaagcatggcttcctctggctgcctgaagggttcacccttcgccgagac
tctagcaatcacaagcgccgtgaacctgtgggacaggatgccgtggggctgaaaaatctc
tcagtgcaagtgtcagaggctaacctgattggttctgggacaagtgaacattgggttgat
gatgaaggaccccagccaaagaaagccaaggctgaggatgaggctttgctacctgaagat
gaccccatcgatcgacgcccctggacacagcagcaccttgaagctgcagacatccgccgg
actccatccctggcgctcactcctcctcaggcggagcaggaggtggctgtgctggacgtg
aatgtccgaggcccagatgggtgtactccactgatgctggcttccctccgaggaggcagc
tctgacctgagtgatgaagatgaggatgccgaggactcttctgctaacatcatcacagat
ttggtctaccaaggtgccagccttcaggcacagacagaccgcactggtgagatggccctg
caccttgcagcccgctattcaagagctgatgctgccaaacgcctcctggacgccggtgca
gatgccaatgcccaggacaacatgggccgctgtcctcttcacgctgcggtcgcagcagat
gcccaaggtgtcttccagattctgatccgcaaccgagtaactgatttagatgccagaatg
aacgatggtactacccccctgattctggctgcccgcctggctgtggaaggaatggtggca
gagctgatcaattgccaagcagatgtgaatgcagtggacgaccatggaaaatctgccctc
cactgggcagctgctgtcaataatgtggaggcgactcttttgctgttgaagaatggggcc
aaccgagatatgcaggacaataaggaagagacacctttgtttcttgctgcccgagaggga
agttatgaagcagccaaaatcctgttagaccattttgccaaccgggacatcacagaccac
atggaccgacttccccgggatgtggctcgggaccgtatgcaccatgacattgttcgcctc
ctggatgagtataacgtgactcccagccctccggggactgtcttgacttctgctctctca
cctgtcctctgtgggcccaacaggcctttcctcagtctgaagcacaccccaatgggtaag
aaggctagacggcccaacgccaagagcaccatgcccacgagcctgcctaaccttgccaag
gaagccaaggatgtcaagggtagtaggaggaagaagtgtctgaacgagaaggtccagctg
tccgagagctcagtgactttatcccctgttgattcgctcgagtctcctcacacatatgtt
tctgatgctacatcctctcccatgatcacatcccctggagtcttgcaggcctcgcccacg
cctctgctggctgctgccgccccagctgccccagtgcatgcacagcatgcactgtctttc
tccaaccttcatgaaatgcagcctttggctcctggagccagcaccgtgctaccctcagtc
agccagctgctatcccaccaccacattgtccccccaggtagtggcagtgcaggaagcttg
ggcaggttacatccagttcctgtcccggcagactggatgaaccgtgtggagatgaatgag
acccagtacaatgaaatgtttggcatggtcctggctcctgcagagggagcccaccctggc
atagcagctccccagggcagacctccagaagggaagcacatctctacccagcgggagccc
ttacctcccattgtgactttccagctcatcccaaaaggcagcattgcccaggcagctgga
gcaccccagacacagtccagctgccctccagctgttgcaggccccttgccctctatgtac
cagatcccagagatggcccgtttgcccagtgtggctttcccacctaccatgatgccccag
caggaggggcaggtagctcagaccattgtgccaacctatcatcctttcccagcctctgtg
ggcaagtaccccacacccccttcccaacacagctacgcctcctcaaatgctgctgagcga
acccccagtcatggtggtcacctccagggtgagcacccatacctgacaccgtccccagag
tctcctgaccaatggtcaagctcttcaccacactctgcatctgactggtcagatgtgacc
accagcccaactcctggaggtggtggagggggtcagcggggacctggaacacacatgtcc
gagccaccaaacagcaacatgcaggtttatgcatga
DBGET
integrated database retrieval system
