Arvicanthis niloticus (African grass rat): 117706744
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Entry
117706744 CDS
T08817
Symbol
Stx5
Name
(RefSeq) syntaxin-5
KO
K08490
syntaxin 5
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117706744 (Stx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117706744 (Stx5)
Membrane trafficking [BR:
anu04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
117706744 (Stx5)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Apolipoprotein
DUF16
YwqH-like
MCPsignal
Vac_Fusion
DUF1664
DUF6746
DUF5063
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
117706744
NCBI-ProteinID:
XP_034355737
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Position
1:116955030..116970928
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AA seq
355 aa
AA seq
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MIPRKRYGSKNTDQGVYLGLSKTQVLSPATAISSSSDIAPLPTPVALVPSPPDTMSCRDR
TQEFLSACKSLQSRQNGIQTSKPALHAARQCSEFTLMARRIGKDLSNTFAKLEKLTILAK
RKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQ
SKLASMSNDFKSVLEVRTENLKQQRNRREQFSRAPVSALPLAPNNLGGGPIVLGAESRAS
RDVAIDMMDPRTSQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEET
IQRIDENVHGAQLDVEAAHSEILKYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgcggaaacgctacggatctaagaacacggatcagggtgtctacctgggtctc
tcaaagacacaggttctgtcccctgcaactgctatcagcagcagcagtgacatcgctcct
ttgcccaccccggtggccctggtcccctcccctcccgacaccatgtcctgccgggatcgg
acccaggagttcctgtctgcctgcaagtcgctgcagagccgtcagaatggaatccaaaca
agtaagccagctctgcatgctgcccgacagtgcagtgaatttactctcatggccaggcgc
attgggaaagatctcagcaatacatttgccaagctggagaagctaacaatcttggcaaag
cgcaagtctctctttgatgataaagcagtagaaattgaggagctaacatacatcatcaaa
caggacatcaatagcctcaacaaacaaattgctcagcttcaagattttgtgagggccaag
ggcagccagagtggccggcatctgcagactcattctaacacgattgtagtttccttgcag
tcaaaactggcttccatgtccaatgacttcaaatcagttttagaagtgaggactgaaaat
ctgaaacagcagaggaaccgtcgggaacagttctccagggcaccagtgtcggccctgcct
cttgcccccaacaaccttggaggtggtcccatagttttgggagcagagtccagagcctcc
agggacgtggccattgacatgatggaccctcgaacaagccagcagcttcagctcattgat
gagcaggattcctacatccagagtcgggcagacaccatgcagaacattgagtctacaatt
gttgagctgggctccatttttcagcagttggcacacatggttaaggaacaggaggagacg
attcagaggattgatgagaatgtgcatggagcccagctggatgttgaggccgcccattca
gagatcctcaagtacttccagtcagtcacctccaatcggtggctcatggtcaaaatcttc
ctcatcctcattgtcttcttcatcatctttgtggtcttccttgcctga
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