Arvicanthis niloticus (African grass rat): 117706784
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Entry
117706784 CDS
T08817
Symbol
Taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117706784 (Taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117706784 (Taf6l)
03036 Chromosome and associated proteins [BR:
anu03036
]
117706784 (Taf6l)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117706784 (Taf6l)
Coactivators
SAGA/TFTC/STAGA complex
117706784 (Taf6l)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117706784 (Taf6l)
STAGA complex
117706784 (Taf6l)
TFTC complex
117706784 (Taf6l)
SAGA complex
117706784 (Taf6l)
SLIK complex
117706784 (Taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
117706784
NCBI-ProteinID:
XP_034355765
LinkDB
All DBs
Position
1:complement(116993651..117007296)
Genome browser
AA seq
623 aa
AA seq
DB search
MQSSTGAMSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQ
FMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREGELYFPEDREVNLVELA
LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYQQVTRAVLGDDP
QLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLIRNPHLCLGP
YVRSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSL
QKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPTYWTNLQAVLDDYSVSNAQVKA
DGHKVYGAILVAVERLLKMKAQAAEPNRGGLGLRGYRPAEDLPWDSLLLQESPPGGGSET
GFGSGLPLPSGVAGPEDPSSLTLADIYRELYSFFGDSLATRFGTGQPAPTAPRPPGDKKE
PAAAPDSVRKMPQLTASAVVSPQGDESPCGGTLAAANAASESRPLPRVHRARGAPRQQGP
GVGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPPPYGPSPASRYVQKLP
MIGRTGRPARRWALSDYSLYLPL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagctccactggggccatgtcagaaagagaagagaggaggtttgtggagatccct
cgggagtcagtccggctcatggcagagagcacagggctggagctgagtgacgaggtggct
gctctgctcgctgaagatgtgtgttaccgtctccgagaggccacccagaatagctctcag
ttcatgaaacacactaagagaaggaagctgacggtggaggacttcaacagggctctcagg
tggagcagtgtggaggctgtgtgtggctatgggtcccaggaggcattgcccttgcgccct
gcaagggagggtgaactctactttccagaggatcgagaagtgaacctggtagagctggca
ctggctaccaacatccctaagggctgtgcagagacagctgtcagagttcatgtctcctat
ctggatggcaaaggaaacctggcacctcagggatcagtgcccagtgcagtgtcttcactg
acagatgacctgctcaaatactaccagcaagtgacccgggctgtactgggcgatgacccc
cagctgatgaaggttgccctccaggacctgcagacaaactctaagattgcagcactcctg
ccttactttgtttatgtggtcagtggggttaaatctgtaagccatgacctggagcagctg
caccgactactgcaggtggcacggagcctgatacggaacccacacctgtgcttggggccc
tatgtccgatccctggtgggcagcgtgctttactgtgtcttggagccactggctgcctcc
atcaaccctttgaatgaccactggactctgagagatggggctgcccttctactcagccac
atcttctggactcatggagaccttgtaagtggcctctatcagcagattctgctctccctg
cagaaggtcctgacagaccctgttcggcctctctgttcccactatggggcagtggtaggg
ctgcatgctctaggctggaaggcagtggaacgagtcctctacccacatctgcctacttac
tggacaaacttgcaggctgtgctggatgactattccgtgtctaatgcccaggtcaaagca
gatgggcacaaagtatatggagctattctggtggccgtagagcgattactgaagatgaaa
gctcaggctgcagagcccaaccgcggtggccttggcctgagagggtaccgacctgcggag
gacctgccttgggacagccttctcctacaagagtctccccccgggggaggctccgaaaca
ggttttgggtctggtctcccgctgccgtcaggggttgcaggaccagaggacccttcttcc
ttgaccctggcagatatctaccgtgagctatactccttctttggtgacagcttggccacc
cgctttggcactggccagcctgctcccacggccccacgaccgcccggagacaagaaggag
cctgcggctgccccggattcggtgcggaaaatgccgcagctgactgccagcgcggtggtc
agccctcagggtgacgaaagcccgtgtggtgggaccctcgccgccgccaacgccgcctcg
gagagcaggccgctgccgcgtgtacaccgagcgcggggcgctcctcgtcagcagggtccc
ggcgtgggaacgcgagacgtcttccagaagagccgcttcgcgccccgtggcgcccctcac
tttcgctttataattgccgggcgtcaggccgggcggcgctgccgtgggcgcctctttcaa
accgcatttcctccaccctatgggcccagccccgcgtcccgctacgtgcaaaagctgccc
atgatcggccgcactggccgcccggcccgccgctgggcgctctcagactactcgctgtac
ctgcctctgtga
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