Arvicanthis niloticus (African grass rat): 117706798
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Entry
117706798 CDS
T08817
Name
(RefSeq) LOW QUALITY PROTEIN: SR-related and CTD-associated factor 8-like
KO
K13191
RNA-binding protein 16
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117706798
03041 Spliceosome [BR:
anu03041
]
117706798
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117706798
Spliceosome [BR:
anu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117706798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
117706798
NCBI-ProteinID:
XP_034355780
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All DBs
Position
4:complement(9283656..9291438)
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AA seq
1015 aa
AA seq
DB search
FDLGEDSEHSEESKKEIPTPQLSHVSESMNNSIFHQIAXQLQLQNLEQLRRQLLEQQQPQ
KVTPQDSQEGTFGFEHSTSPPQGSSQQHFLEPEANLDDFIDIQQQDMDIDEGQDVVEEEI
FEPEAKKVAVRSRSRTHSRSRSRSPRKRRSRSGSGSLKRKHRKHSRSHSRERKRKSSCSY
SSECRAREKGERTPKKKKKDLPPVRSKTLSVCSTTLRVGQVDKKATQQDLTNLFEEFGQI
ESINMIPPRGCAYVCMVHRQDSFWALQKLSSGSYKIGSKVIKIAWALNKGVXTEYKQFWD
MDLGVTYIPVGPNTSYKSEAGGATTSGTTLSQAVANTATSVAPPDPVPKSPVASGVPQAP
APTRLLVGSPRGDAAPRPAQASSPPTGSRDAEKKVLTTKVLGTVKCHLLDDLDGFAEGGM
IDHETVNAEWETVKASEPVKETVQTTQSPTPVEKETVVTTQAKVFPPPVAMLQISVAPAV
PAVSLVPPAFLVSMPVPPPGFSPIPPPPFLQASFNPSQPPPGFMPPPVPPPVVPPPAIPP
VVPTSLVQPPLSMTPEIVKDVGFGSLVLPGSSVAGSLAPSTLPAGNVFNPPSKADPEEKV
PHLTEHQIPSGENTRXGDIPSSAAMLTQPLGPSSTSGILCVLRPNVSSNSEILGVHPANV
SNSATIMGAQPPNILNNSGILGIQPPNVSSGSGLLGVLPPNLPNNSGLVGLQPPNVTNPA
GLLGTQPPIGPQNLPPLTIPAQRMPALPMLDICPGLIAQAPGPRFPLLQPEIPPQRGIPP
PSVLDAALHPPPRGPFPPRDLFSQPDRTFLAPGRPSIDNVLNPDKRLPLGNDNIQQEGDR
DYCFPPLETREVITRPPPVDVRDVVGRPIDPREGILEVVLGTEDLDKKFTEILMTSEDPG
RGRGIGMTEILISAEKLMEIVLDEIEFKTLGFLLLMLGFWIVLKGPLLNRKVIMCLKLMV
KIQNSFNVKEMLTACRRLPMEERVLDTVIGLGMAVTYFRTARCGTSSYLYAAAGF
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
tttgatttgggggaagattctgagcatagtgaagaatccaaaaaggaaattcctactccc
caactctctcacgtttctgagtctatgaacaactccatctttcatcagatagcatagcag
ctgcagctgcagaacctggagcaattgaggcggcagctcctggagcagcagcagcctcag
aaggtaactcctcaggacagccaggaaggaacatttgggtttgagcactccacttcaccc
ccacaagggagtagccagcagcattttctggaacctgaagcaaatttagatgatttcata
gacattcagcaacaggatatggatattgatgaagggcaagatgttgttgaagaggagatc
tttgaaccagaagctaagaaagtagctgttcgctcaagatcaagaactcattcacgatct
cgatcaaggtcaccaagaaaacgaaggtctaggtcaggctctgggtccctaaagcgaaag
cacaggaagcattctcgctctcactcaagagagagaaagagaaaatcctcatgttcctat
tcaagtgaatgcagagccagggaaaagggagaaagaacgccaaaaaaaaaaaaaaaggac
ttgcctcctgtcagatcgaaaacactaagtgtatgcagcactactctccgggttggccaa
gtggataagaaggctacacagcaagacttaaccaacctttttgaggagtttggacaaatt
gaatccattaatatgattccacccaggggctgtgcatatgtctgtatggttcatcgacaa
gattcattttgggctcttcagaaactgagttcaggatcctataaaattggttctaaggtc
attaagattgcctgggctttgaacaaaggtgtanngactgaatacaaacagttctgggac
atggatcttggtgtcacatatatacctgttgggcctaacacgagctacaagagcgaggct
ggcggggccaccaccagtggcaccacgctctcacaggctgtggccaacaccgcgacatct
gtggcacccccagacccagtgcctaagagccctgtggccagtggtgtgccccaggccccg
gcgcccaccaggctgcttgtagggagccccagaggagatgcagcccccaggcccgcccaa
gcctcatcacctcctacaggtagcagggacgcagagaaaaaggttctcaccaccaaagtc
cttggcactgtcaaatgtcatctattagatgacttggatggctttgcagagggaggcatg
attgatcacgaaactgtaaatgctgaatgggaaactgtgaaagcctcagaacctgttaaa
gagacggtccagactacacagagtcctactccagttgaaaaggagacagtggtcacaacc
caggccaaggtttttcctcctcctgttgccatgctgcagatttccgtagcaccagcagtt
cctgcagttagcttagttccaccagcgtttcttgtgtcaatgcctgtcccccctcctgga
ttcagcccaatccctccacctccttttctacaagcaagttttaatccttcacaaccacct
cctggttttatgccacctccagttcccccacctgtggtacctccccctgcaatcccacct
gtagtaccaacatctttagtgcaaccaccattgtccatgaccccagaaattgtgaaagat
gtgggatttgggagcctggttttaccgggcagttctgttgctggcagtcttgctccttca
actctaccagctgggaatgtttttaatcctccaagtaaagcagaccctgaagagaaagta
cctcaccttacagaacaccagattccttctggtgagaataccaganccggtgatattcca
agtagcgctgcaatgttaacacagccacttgggccctcaagcacctctgggatcctgtgt
gtgctgagaccaaatgtatcaagtaattctgaaattctgggggttcatccagctaatgtt
tccaacagtgctacgattatgggagcccagccaccaaatattctaaataactctggaatt
ttgggcatacagccaccaaatgtatctagtggctctggacttcttggggtactgcctcca
aacttgcctaacaactctggacttgtaggactacagccaccaaatgttacaaatcctgct
ggattgttgggaacacagcctccaattggacctcagaacttacccccgttaaccatccct
gctcaaaggatgcctgcactgccaatgctagacatttgtcctggactgatagcacaggct
cccgggccaagattccctttactccagcctgaaattccaccacaacggggtatccctccc
ccatcggtacttgatgcagctcttcatcctccaccccgtggaccttttcctccaagagat
cttttcagtcagccagatagaacttttctggctcctggaagaccaagtatagacaatgtt
ctcaacccagataaaagactaccacttgggaatgacaatattcagcaggaaggggataga
gattattgctttcctcctctagaaaccagggaggtcattactagacctcctccagtggat
gttagagatgtggttgggcgacctatagatcccagagaagggatcctagaagtggtcctt
ggaacagaggatttggataagaagttcacagagattttgatgacctcagaagaccctggg
agaggcagagggatagggatgacagagattttgatttctgcagagaaattaatggaaatc
gtcttggatgagatagaattcaaaacacttgggttcctcctcctcatgcttgggttttgg
attgttttgaaggggccacttctcaacagaaaggtgataatgtgcctcaagttaatggtg
aaaatacagaattcttttaacgtcaaggagatgctaacagcttgtcggagacttcctatg
gaagagagggttttagacactgtcattgggttgggtatggcagtgacgtatttcagaaca
gcaaggtgtggcacatcttcgtatctctatgctgctgcaggattttaa
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