Arvicanthis niloticus (African grass rat): 117706853
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Entry
117706853 CDS
T08817
Symbol
Nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04010
MAPK signaling pathway
anu04064
NF-kappa B signaling pathway
anu04380
Osteoclast differentiation
anu04625
C-type lectin receptor signaling pathway
anu05134
Legionellosis
anu05166
Human T-cell leukemia virus 1 infection
anu05169
Epstein-Barr virus infection
anu05200
Pathways in cancer
anu05203
Viral carcinogenesis
anu05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117706853 (Nfkb2)
04064 NF-kappa B signaling pathway
117706853 (Nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117706853 (Nfkb2)
09158 Development and regeneration
04380 Osteoclast differentiation
117706853 (Nfkb2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117706853 (Nfkb2)
05203 Viral carcinogenesis
117706853 (Nfkb2)
09162 Cancer: specific types
05224 Breast cancer
117706853 (Nfkb2)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
117706853 (Nfkb2)
05169 Epstein-Barr virus infection
117706853 (Nfkb2)
09171 Infectious disease: bacterial
05134 Legionellosis
117706853 (Nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117706853 (Nfkb2)
Transcription factors [BR:
anu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
117706853 (Nfkb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_5
Ank_4
Death
Motif
Other DBs
NCBI-GeneID:
117706853
NCBI-ProteinID:
XP_034355849
LinkDB
All DBs
Position
1:152688933..152696622
Genome browser
AA seq
900 aa
AA seq
DB search
MDSCYDPGLDGITEYDDFEFSPSIVEPKDPAPETANGPYLVIVEQPKQRGFRFRYGCEGP
SHGGLPGASSEKGRKTYPTVKICNYEGPAKIEVDLVTHSDPPRAHAHSLVGKQCSELGVC
AVSVGPKDMTAQFNNLGVLHVTKKNMMEIMIQKLQRQRLRSKPQGLTEAERRELEQEAKE
LKKVMDLSIVRLRFSAFLRASDGSFTLPLKPVISQPIHDSKSPGASNLKISRMDKTAGSV
RGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKMKIE
RPVTVFLQLKRKRGGDVSDSKQFTYYPLVEDKEEVQRKRRKALPTFSQPFGGGSHMGGGS
GGSAGGYGGAGGGGSLGFFSSSLAYGPYQSGAAPMGCYPGGGGGAQMAGSRRDTDAGEGA
EEHRAPPETPQGEPQALDTLQRAREYNARLFGLAQRSARALLDYGVTADARSLLAGQRHL
LMAQDENGDTPLHLAIIHGQTGVIEQIAHVIYHAQYLGVINLTNHLHQTPLHLAVITGQT
RVVSFLLQVGADPTLLDRHGDSAIHLALRAGAAAPELLQALLHSGAHAVPQILHMPDFEG
LYPVHLAVHARSPECLDLLVDCGAEVEAAERQGGRTPLHLATEMEELGLVTHLVTKLHAN
VNARTFAGNTPLHLAAGLGSPTLTRLLLKAGADIHAENEEPLCPLPSPPTSGSDSDSEGP
ERDTQRDFRGHTPLDLTSSTKVKTLLLNAAQNIMEPPLAPPSPAGPGLSLGDAALQNLEQ
LLDGPEAQGSWAELAERLGLRSLVDTYRKTPSPSGSLLRSYKLAGGDLVGLLEALSDMGL
HEGVRLLKGPETRDKLPSTAEVKEDSAYGSQSVEQEAEKLCPPPEPPGGLCHGHPQPQVH
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggacagttgctacgatccaggtctggatggcatcaccgaatatgatgattttgaattc
agcccctccattgtggagcccaaggacccagccccagagacagctaatggcccctatctg
gtgattgtggagcagcccaaacagcgaggcttcagatttcgatatggctgtgaaggcccc
tcccatggaggcctgccaggtgcctccagtgagaagggacggaagacctatcctactgtc
aagatctgtaactacgagggaccggccaagattgaggtggacctggtgacacacagtgac
ccacctcgggcacatgcccacagtctggtgggcaagcagtgttcagagctgggtgtatgt
gctgtgtctgtaggacccaaggacatgactgctcaatttaataatctgggtgtcctgcat
gtaaccaagaagaacatgatggaaattatgatccaaaaacttcagaggcagcggctccgc
tccaagcctcaggggcttacggaggccgagcggcgggagctagagcaggaggccaaggag
ctgaagaaagtcatggatctgagtatcgtgaggctgcgcttctcggctttcctccgagct
agcgatggctccttcaccctgcccctgaagcctgtgatctctcagcccatccatgacagt
aagtctccaggggcctcaaacctgaagatttcccgaatggacaagacagcaggttccgtg
cgtggtggagacgaagtttatttgctttgtgataaagtgcaaaaagatgacattgaggtt
cggttctatgaggatgacgagaatggatggcaagccttcggggacttctctcccacagac
gttcataaacagtatgccattgtgtttcggactccgccctatcacaagatgaagattgag
aggcctgtaacagtgtttctgcagctgaaacgcaagcgtgggggcgatgtctccgactcc
aaacagttcacgtattaccctctggtagaagacaaggaggaagtacagaggaagcggaga
aaggccttgcccaccttctcccagcccttcgggggcggatcccacatgggtggaggttct
gggggctccgctgggggttatggaggcgctggaggaggtggcagccttggctttttctcc
tcctccttggcctatggcccctaccaatccggtgcagccccaatgggctgctacccgggt
gggggaggtggagcacagatggctggctctaggcgggacacagatgctggtgagggggca
gaggaacacagggcgccccccgagactccccagggcgaaccacaggccctcgacacgctg
cagcgagctcgcgagtacaacgcgcgcctcttcggtctggcgcagcgcagcgcccgagcg
ttgctggactacggcgtcacggcggatgcgcgttctctgctagcgggacagcgccacctg
ctgatggcacaggacgagaacggagacacgccactgcacctggccatcatccatgggcag
actggtgtcattgagcagatagcccatgtcatttatcatgctcagtaccttggggtcatc
aacctcaccaaccacctgcaccagacacctctgcacctggcagtaatcactgggcagacc
agggtggtgagcttcctgctgcaggtgggtgcagaccccacactgctggatcggcatgga
gactcagctatccacttggctctccgggcaggtgctgcagcgccagagctgttgcaggca
ctgttgcacagtggcgcccacgctgtgccccaaatattgcacatgcctgattttgaggga
ctatacccagtacacctggcagtccatgcccgaagccctgagtgcctggatctgttagtt
gactgtggagctgaagtggaggcagcagagagacaagggggccgaaccccactgcatcta
gccacagagatggaggagctggggttggtcacccatctggtcaccaagctccatgctaat
gtgaatgcccggacctttgctggaaacacgcccctccacctggcggctggacttggatcc
ccaaccctcactcgcctccttctaaaggctggtgctgacatccatgcagagaacgaggag
cctctgtgcccgctgccctcaccccctacctctgggagcgactcagactctgaagggcct
gagagggacacccaaagagacttccgaggccatacccctcttgacctcacttccagtacc
aaggtgaagactctgctgctaaatgctgctcagaacatcatggagccacccctggcccca
cccagccctgcagggccagggctgtcactgggggatgcagccctgcagaacctggaacaa
ctgctagatgggccggaagcccagggcagctgggcagaactggcagagcggctggggcta
agaagcctggtggacacatacaggaagaccccgtctcccagcggcagtctccttcgtagt
tacaagctggctggtggggacttggtgggtctattggaggccttgtccgacatgggcctt
catgagggagtcagactgctgaaaggtcctgagacccgagacaaactgcccagcacagca
gaggtgaaagaagacagtgcttatgggagccagtcggtggagcaggaggcggagaagctg
tgtccaccccctgagcctccaggagggctctgccacgggcacccccagcctcaggtgcac
tga
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