Arvicanthis niloticus (African grass rat): 117706862
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Entry
117706862 CDS
T08817
Symbol
Sort1
Name
(RefSeq) sortilin isoform X1
KO
K12388
sortilin
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04142
Lysosome
anu04722
Neurotrophin signaling pathway
anu04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117706862 (Sort1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
117706862 (Sort1)
09156 Nervous system
04722 Neurotrophin signaling pathway
117706862 (Sort1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Motif
Other DBs
NCBI-GeneID:
117706862
NCBI-ProteinID:
XP_034355871
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Position
4:87413121..87488710
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AA seq
825 aa
AA seq
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MERPRGAADGLLRWPLGLLLLLQLLPPAAVGQDRLDAPPPPAPPLLRWAGPVGVSWGLRA
AAPGGPVPRAGRWRRSAPAEDEDCGRLPDFIAKLTNNTHQHVFDDLSGSVSLSWVGDSTG
VILVLTTFQVPLVIVSFGQSKLYRSEDYGKNFKDITNLINNTFIRTEFGMAIGPENSGKV
ILTAEVSGGSRGGRVFRSSDFAKNFVQTDLPFHPLTQMMYSPQNSDYLLALSTENGLWVS
KNFGEKWEEIHKAVCLAKWGPNNIIFFTTHVNGSCKADLGALELWRTSDLGKTFKTIGVK
IYSFGLGGRFLFASVMADKDTTRRIHVSTDQGDTWSIAQLPSVGQEQFYSILAANEDMVF
MHVDEPGDTGFGTIFTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYITSTLSED
NSIQSMITFDQGGRWEHLRKPENSKCDATAKNKNECSLHIHASYSISQKLNVPMAPLSEP
NAVGIVIAHGSVGDAISVMVPDVYISDDGGYSWAKMLEGPHYYTILDSGGIIVAIEHSNR
PINVIKFSTDEGQCWQSHAFTQEPIYFTGLASEPGARSMNISIWGFTESFITRQWVSYTI
DFKDILERNCEEDDYTTWLAHSTDPGDYKDGCILGYKEQFLRLRKSSVCQNGRDYVVAKQ
PSICPCSLEDFLCDFGYFRPENASECVEQPELKGHELEFCLYGKEEHLTTNGYRKIPGDR
CQGGMNPTREVKDLKKKCTSDLLNPKKQNSKSNSVPIILAIVGLMLVTVVAGVLIVKKYV
CGGRFLVHRYSVLQQHAEADGVEALDTASHAKSGYHDDSDEDLLE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggagcggccccggggagctgcggacggccttttgcgctggcccctcggcctcctcctg
ctcctgcagctgctgccgccggccgccgtcggccaggaccggctggacgcgccgccgcct
cccgctcctcctctgctgcgctgggccggtccggtcggggtgagctgggggctgcgcgcc
gccgcgcctgggggccccgtcccccgcgctggccgttggcgccgcagcgcgcccgccgag
gacgaggactgcggccgcctcccggacttcatcgccaagctgaccaataatacgcaccag
catgtctttgatgacctcagtggctcagtgtccttgtcctgggttggagacagcactggg
gttattctcgtcctgactactttccaagtgccactggtaattgtgagttttggacagtcc
aagttatatcgaagtgaggattatgggaagaactttaaggatattacaaatctcatcaat
aacaccttcattcggacggagtttggcatggctattggtcctgagaactctggaaaggtg
atattaacagcagaggtgtctgggggaagccgaggaggaagagtgttcaggtcatcagac
tttgccaagaactttgtgcagacagatctcccctttcatcctctgactcagatgatgtac
agccctcagaattctgattacctgttagctctcagcactgaaaatggcctgtgggtgtcc
aagaattttggggaaaaatgggaagaaatccataaagcagtatgtttggccaaatgggga
ccaaacaacatcatcttctttaccacccatgtgaatggctcctgcaaagctgatcttggt
gccctggaattatggagaacatccgacttagggaaaaccttcaaaaccattggtgtgaaa
atctactcatttggtcttgggggccgtttcctctttgcctctgtgatggctgataaggat
acaacaagaaggatccacgtgtcaacagaccaaggagacacatggagcatagcacagctt
ccttctgtggggcaggaacaattctattctattctggcagccaatgaggacatggtattc
atgcatgtagatgaacctggagatactgggtttggcacaatctttacctctgatgaccga
ggcattgtctactccaagtctctggacagacatctctataccaccacaggcggggagacc
gactttaccaacgtgacttccctccgtggggtctatataacgagcacgctctcagaagat
aactccattcagagcatgatcacttttgaccagggaggacggtgggagcacctgcggaag
ccggagaacagcaaatgcgatgccaccgcaaagaacaagaatgagtgcagccttcatatc
catgcttcttatagcatctcccagaagctaaacgttccgatggccccactctctgagccc
aatgccgtgggcattgtcatcgctcacggtagtgtgggagacgccatctcggtgatggtc
ccagacgtgtacatctcagatgatgggggttactcctgggcaaagatgctagagggaccg
cattactataccatcctggattctggaggcatcatcgtggccattgagcacagcaaccgt
cctatcaatgtgattaagttctccacagatgaaggccagtgctggcagagccatgcgttc
acacaggagcccatctacttcaccgggcttgcttccgagcctggagccaggtccatgaac
atcagcatctggggattcacagagtctttcattacccgccagtgggtctcctacacaatt
gatttcaaagacatccttgagcggaattgtgaagaggatgactacaccacatggctggca
cattccacagaccccggagattacaaagatggctgcattttgggctataaagaacagttc
ctacggctacggaagtcatccgtctgtcagaatggtcgagactatgttgtggccaagcag
ccatccatctgtccgtgctccctggaggacttcctctgtgactttggctacttccgtcca
gagaatgcctcagagtgtgtggagcagccagaactgaaggggcatgagttagagttctgt
ctgtatggcaaggaggagcacctgacaacgaatgggtaccgaaaaatcccaggagacaga
tgccaaggagggatgaatccaacccgagaagtaaaagacttgaaaaagaaatgcacaagt
gacttattgaaccccaagaagcagaattccaagtcgaattctgtccctattatcctggcc
atcgtgggactgatgcttgtcacagttgtagcaggggtcctcattgtgaagaaatatgtc
tgtggtggaaggttcctggtacaccgatactctgtgctacagcagcacgcagaggctgac
ggagtggaggctttggatacggcctcccacgctaaaagcggttatcacgatgattcagat
gaggacctcctggaatag
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