Arvicanthis niloticus (African grass rat): 117706880
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Entry
117706880 CDS
T08817
Symbol
Smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117706880 (Smc4)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
117706880 (Smc4)
Condensin II
117706880 (Smc4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
DUF192
ATG17_like
ABC_tran
Motif
Other DBs
NCBI-GeneID:
117706880
NCBI-ProteinID:
XP_034355899
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All DBs
Position
4:50221008..50250049
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AA seq
1286 aa
AA seq
DB search
MRRKGTKTSTACHQEEGPPPSQDDAHNEGEMEQPDGGADSAAAAETPGEELDNRSLEEIL
NSIPPPPPPAMASEAGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNV
IDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVLPDSN
FYVSRTAYRDNTSVYHISGKKRTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKG
QTEHDEGMLEYLEDIIGCGRLNEPIKVLCRRVEILNEHRGEKLNRVKMVEKEKDALEGEK
NIAIEFLTLENEIFKKTNHICQYYIYDLQNRIAEMKTQKEKIHEDTKEITEKSNVLSNEM
KAKNSAVKDIEKKLNKVTKFIEQNKEKFTQLDLEDVQVREKLKHSTSKAKKLEKQLQKDK
EKVEELKSIPAKSKNIINETTTRKNSLEKEREKEEKKLKEVMDSLKQETQGLQKEKEIQE
KELMGFNKSVNEARSKMEVAQSELDIYLSRHNTAVSQLSKAKEALITASETLKERKAAIK
EINTKLPQTQQELKEKEKELQKLTQEEINLKNLVHDLFQKVEEAKSSLAMNRSRGKVLDA
IIQEKKSGRIPGIYGRLGDLGAIDEKYDIAISSCCHALDYIVVDSIDTAQECVNFLKKHN
IGVATFIGLDKMAVWAKKMSKIQTPENTPRLFDLVKVKNEEIRQAFYFALRDTLVANNLD
QATRVAYQKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMGSSVIDEISVEEVNKMESQ
LERHSKQAMQIQEQKVQHEEAVVKLRHSEREMKNTLEKFTASIQGLSEQEEYLCVQIKEL
EANVLTTAPDKKQQKLLEENVNVFKKEYDAVAEKAGKVEAEIKRLHDTILDINNRKLKAQ
QNKLDTINKQLDECASAITKAQVAIKTADRNLKKAQDSVCNTEKEIKDTEKEINDLKTEL
KNIEDNAEEVIKNTKAAETSLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQID
GHISEHNSKIKYWQKEISKIKLHPIEDNPVETVSVLSQEDLEAIKNPDSITSQIALLEAQ
CREMKPNLGAIAEYKKKEDLYLQRVAELDKITSERDNFRQAYEDLRKQRLNEFMAGFYVI
TNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLA
LVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRL
IGIYKTYNITKSVAVNPKEIASKGLC
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgtaagggcaccaagacctccactgcctgccatcaggaggaagggccgccgccc
tcccaggacgatgcccacaacgaaggggagatggagcaaccggacggcggagcggacagc
gccgcagctgcagagactccaggtgaggagcttgataacagaagtttagaagagattttg
aatagtattcctccacccccacctccagcaatggccagtgaagctggagctcctcgtctt
atgataactcatattgtaaaccaaaacttcaagtcttatgctggagagaaaattctggga
cctttccataagcgcttttcctgtatcattggaccaaatggcagtggaaaatccaatgtt
attgattccatgctttttgtgtttggctatcgagcacaaaaaataaggtctaaaaagttg
tcagtactaatacataattctgatgaacacaaggatattcaaagttgtactgtagaagtt
cattttcaaaagataattgataaggaaggggatgattatgaagtccttcctgacagcaac
ttctatgtatctagaacagcctacagagataatacttcagtctatcatataagtgggaag
aagaggacatttaaagatgttggaaatcttcttagaagccatgggattgatttagaccat
aatcgatttttaatcttgcagggtgaagttgaacagattgctatgatgaaaccgaaaggc
cagactgaacatgatgagggtatgcttgagtatttagaagatataattggctgtggacgg
ctaaatgaacctattaaagtcttgtgtcggagagttgaaatattaaatgaacacagagga
gaaaagttaaacagagtaaaaatggtagaaaaagagaaggatgcactagaaggagagaaa
aacatagccattgagttccttaccctggaaaatgaaatatttaagaaaacgaatcacatc
tgtcaatactacatttatgatctacaaaatagaattgctgaaatgaagactcaaaaggaa
aaaattcatgaagatactaaagaaattactgagaagagcaatgtgctttccaatgaaatg
aaagctaagaattcagctgtaaaggatatagaaaagaagctcaataaagttacaaaattt
attgaacaaaataaagaaaaatttacacagctagatttggaagatgttcaagttagggaa
aaattaaaacattctacaagtaaagccaaaaaactggagaaacagcttcaaaaagataaa
gaaaaggttgaagagctgaaaagtatacctgccaagagtaagaatatcataaatgagaca
acaactaggaagaactctcttgagaaagaaagagaaaaagaagaaaaaaagttaaaagag
gtcatggacagccttaaacaggaaacacaggggcttcagaaagaaaaggagattcaagaa
aaagaacttatgggttttaacaaatcagtaaatgaagcacgttcaaagatggaagtcgct
cagtcagaacttgatatctatctcagtcgacataatacagcagtgtctcaattaagtaag
gcaaaggaagctttaattacagcttctgagactctcaaggaaaggaaagctgcaatcaag
gagataaacacaaaacttcctcagactcaacaagaattaaaggagaaagaaaaagaactt
cagaaattgacacaagaagaaataaacttaaaaaatttggttcatgatcttttccaaaaa
gttgaagaagcaaagagttccttagcaatgaatcgaagtagaggcaaagtactggatgca
ataattcaagaaaaaaaatcaggcaggatcccaggaatatatggacgattgggagactta
ggagccattgatgaaaaatatgacattgctatttcatcctgttgtcatgcattggactac
attgttgttgattctattgatacagcccaagaatgtgtaaacttccttaaaaaacataat
attggagttgcaactttcataggtttggataagatggcagtgtgggccaaaaaaatgagc
aaaattcaaactcctgaaaatactcctcggttatttgatttagttaaagtaaaaaatgag
gaaatccgccaagctttttactttgctttacgagataccttggtggctaacaatttggat
caagctacaagagtagcatatcaaaaagacagacgatggagagtagtaactctacagggc
cagatcatagaacagtcaggtacaatgactggtggtggaagcaaagtcatgaaaggaaga
atgggttcttcagttatcgatgaaatctctgtagaagaggtaaataagatggaatcccag
ttggaacggcattctaaacaagcaatgcaaatccaagaacagaaagtacaacatgaagaa
gcagtagttaagttaaggcatagtgaacgagaaatgaaaaatacactagaaaagttcact
gcaagcatccagggtttatcagaacaagaagagtatttatgtgtacaaattaaagagctg
gaagctaatgtgcttacaacagcccctgataaaaagcagcagaaactgctcgaagaaaat
gtcaacgttttcaaaaaagaatatgatgctgtagctgagaaagctggtaaagttgaagct
gagattaaacggctacatgacaccatcctagatatcaacaatcgaaaactcaaggcccaa
caaaacaaacttgacacaataaataagcagctggatgagtgtgcttctgctattaccaaa
gcccaagtcgcaatcaagactgctgatagaaatcttaaaaaggcacaggattctgtttgc
aacacagagaaagaaataaaagacactgaaaaagaaataaatgacttaaaaacagaacta
aaaaatattgaagacaatgcagaagaggtcataaaaaatacaaaagctgcagagacgtcc
ctaccggaaatccagaaagaacatcgtaatctacttcaggaactaaaagttattcaagaa
aatgaacatgctcttcagaaagatgcacttagtattaagttaaaacttgagcagatagat
ggccacatttctgaacataactcaaaaataaaatactggcaaaaagagatttcaaaaata
aaattgcatcctattgaagataatcctgttgagacagtatcagttctaagccaagaggat
cttgaagcaatcaagaatccagattctataacaagtcaaattgcacttttggaagctcag
tgtcgtgaaatgaaaccaaaccttggtgccatcgctgagtataaaaaaaaggaagactta
tatttgcaaagagtagccgaactggacaaaattacttctgaaagagataattttagacaa
gcatatgaagatcttcgaaaacaaaggctgaatgaatttatggctggtttttacgtaata
acaaataaactaaaagaaaactaccagatgctcactttgggaggggatgctgaactggag
cttgtggatagtttagatcctttttctgaaggaatcatgttcagtgttcggccacctaag
aaaagttggaagaagatctttaacctttcaggaggtgaaaaaacccttagttcgttggcc
ttagtgtttgcccttcaccactacaagcccactcccctctacttcatggatgagattgat
gcagctctggattttaaaaacgtgtctattgttgcattttacatatatgagcaaacaaaa
aatgcccagttcataataatctctctacgaaataatatgtttgagatttcagatagactt
attggcatctataaaacatataacattacaaaaagtgttgcagtgaacccaaaagaaatt
gcatctaaaggactctgttga
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