Arvicanthis niloticus (African grass rat): 117706922
Help
Entry
117706922 CDS
T08817
Symbol
Dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117706922 (Dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117706922 (Dhx36)
03012 Translation factors [BR:
anu03012
]
117706922 (Dhx36)
Enzymes [BR:
anu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117706922 (Dhx36)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117706922 (Dhx36)
Translation factors [BR:
anu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117706922 (Dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
ATPase
AAA_14
NPHP3_N
AAA_23
DUF6782
Motif
Other DBs
NCBI-GeneID:
117706922
NCBI-ProteinID:
XP_034355988
LinkDB
All DBs
Position
4:complement(44853330..44895669)
Genome browser
AA seq
1000 aa
AA seq
DB search
MSYDYHQSWSRDGGPRGSGQGSGAGGGGSQSSGGGGGGRGGRGRHPAHLKGREIGLWYAK
KQTQKNKEAERQERAVVHMDERREEQIVQLLNSVQTKNDKDSEAQISWFAPEDHGYGTEV
SSEKKMNSEKKLDSQEKKLLNQEKKTFRTTEKSYIDRDSEYLLQENEPNVGLDQQLLEDL
QKKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNY
IERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSIL
YCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSAT
LNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKLRYVPEQKEHRSQFKRGFMQGHVN
RQEKEEKEAIYKERWPAYIKELRTRYSASTVDVLQMMDDDKVDLNLIAALIRYIVLEEED
GAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIV
IATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQP
GHCYHLYNGLRESLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVV
LSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFK
DPFVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSS
NTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVAKIRL
NLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFQYNWLIYHLKMRTSSIYLYDCTEVSPY
CLLFFGGDISIQKDNDQDIIAVDEWIVFQSPERIAHLVKGLRKELDILLQEKIECPHPVD
WNDTKSRDCAVLSAILDLIKTQEKATPRNLPPRSQDEYYS
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgattatcatcagagctggagccgcgacgggggcccacggggctccggccag
ggctccggcgctggcggcggagggagccagagctccggcggcggcggagggggccgcggc
ggccggggccggcatcccgcacaccttaagggtcgcgagatcggcttgtggtacgccaag
aagcagacgcaaaagaacaaggaggctgagaggcaggagagagctgtagtgcacatggat
gaacgccgagaagagcaaattgtgcagctgctaaattcagtccaaactaagaatgataaa
gattcagaagcacagatatcctggtttgcccctgaggatcatgggtatggaactgaagtt
tcttcagagaaaaaaatgaactcagagaagaaacttgacagccaggaaaagaaattgctg
aaccaagaaaaaaagacatttaggaccacagaaaaatcatacattgaccgagattctgag
tatttattgcaagaaaatgagccaaacgtaggcctagatcaacaattattggaagattta
caaaagaaaaaaactgaccctcggtatatagagatgcagcgtttcagaaaaaagctgcct
tcatatggaatgcagaaggagctggtaaatttaatcaataaccatcaagtgacagtaata
agtggtgaaactggttgtggcaaaaccactcaggttacgcagttcatcttggataactac
atcgaaagaggaaaagggtctgcctgcagaatagtgtgcactcagccaagaagaattagt
gccatttcagttgctgagagagtggccgcagaaagggcagagtcttgtggcaatggtaat
agtactggataccagattcgtctccaaagtcggttgccaaggaaacaaggctctatctta
tactgcacaacaggaatcattcttcagtggctccagtcagactcacgtttgtctagtgtt
agccatattgtacttgatgaaattcatgagaggaatctacagtcagatgttttaatgact
gttattaaagatcttctccattttcgatcggatctcaaagtaatattgatgagtgcaacc
ttgaatgctgagaaattttcagaatattttggtaactgtccaatgatacatatacccggg
tttacttttccagttgtggaatatcttttggaagatatcattgaaaaactaagatatgtt
ccagaacaaaaagaacatagatcccagttcaagaggggtttcatgcagggtcatgtcaat
aggcaagaaaaagaagaaaaagaggctatctataaggaacgctggccagcttatataaag
gaactgcgaacaagatactctgcaagtaccgtagatgttttgcaaatgatggatgatgat
aaagttgatctgaatttgattgctgcccttattcgatacattgttttggaagaagaggat
ggtgcaatattggtctttctaccaggctgggacaatatcagtactttgcatgatctcttg
atgtcacaagtgatgtttaaatcagataagtttcttattatacctttacattcactgatg
cctactgtaaaccagacacaggtatttaaaaaaactcctcccggtgttcggaaaatagta
attgctaccaacattgcagaaactagcatcaccatagatgatgtggtttatgtaatagat
ggagggaaaattaaagaaacacactttgacacacagaacaacataagtaccatgtctgct
gagtgggttagtaaagctaatgccaaacagaggaaagggagagctggaagagttcagcct
ggtcactgttatcatctgtataatggtcttagggaaagccttctagatgactaccaacta
ccagaaattttgagaactccgttggaagaactttgtctgcaaataaagattttgaggctg
ggtggaattgcttattttctgagtaggttaatggacccaccatcaaatgaggcagtagtg
ctctccataaaacacctaatggaactgagtgctttggataagcaagaagaattgacacct
cttggcgtccatttagcccgactgcctgttgagccacatattggaaaaatgattctcttt
ggagctttgttctgttgcttagatccagtcctcaccattgctgctagtctcagctttaaa
gatccctttgtcattccattgggaaaagaaaagattgcagatgcaagaagaaaggaactg
gcaaaggaaactagaagtgatcacctgacagttgtgaatgcgtttgagggctgggaagaa
gccaaacgacgtggcttcagatatgaaaaggactactgctgggaatactttctgtcttcc
aacaccctacagatgctgcataacatgaagggacagtttgctgagcatcttcttggagct
ggatttgtaagcagtagaagtcccaaagatccaaaagctaacataaattcagataatgag
aagataattaaagctgtcatctgtgctggtttatatccaaaagttgctaaaatccgacta
aatttgggtaaaaaaaggaaaatggtgaaagttcacacaaagtctgatggtctggtttct
attcatcctaagtctgtcaatgtggagcagacagacttccagtacaactggcttatctat
cacctgaagatgagaacaagcagtatatacttgtatgactgcacagaagtttcaccatac
tgcctcttgttctttggaggagatatttccatccagaaagataacgaccaggacattatt
gctgtagatgaatggattgtgtttcagtctccagaaagaattgcccatcttgttaaggga
ctacgaaaggaactggacatccttctacaagagaagattgaatgccctcatcctgtagac
tggaacgacactaagtccagagactgtgcagtactgtcagctattctagacttgatcaaa
acacaagaaaaggctactccaaggaacttgccaccacggtcacaggacgaatattacagc
tga
DBGET
integrated database retrieval system
