Arvicanthis niloticus (African grass rat): 117706953
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Entry
117706953 CDS
T08817
Symbol
Usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
anu01002
]
117706953 (Usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117706953 (Usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117706953 (Usp13)
Enzymes [BR:
anu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117706953 (Usp13)
Peptidases and inhibitors [BR:
anu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117706953 (Usp13)
Ubiquitin system [BR:
anu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117706953 (Usp13)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117706953 (Usp13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
UBA_9
UBA_8
Motif
Other DBs
NCBI-GeneID:
117706953
NCBI-ProteinID:
XP_034356062
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All DBs
Position
4:18286419..18394550
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AA seq
858 aa
AA seq
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MQRRGALFSVPGGGGKMAAEDLGELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEGGL
YVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHMREKVRGASGGALPKRRNSKIFLDLDL
DDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPDAW
ENELPVSKYANNLVQLENGVRIPPSGWKCAQCDLRENLWLNLTDGSILCGKWFFDSSGGN
GHALEHYRDMGYPLAVKLGTITPDGADVYSFQEEGPVSDPHLAKHLAHFGIDMLHTQGTE
NGLRDNDIKPRVSEWEVIQESGTKLKPMYGPGYTGLRNLGNSCYLSSVMQAIFSIPEFQR
AYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQQN
GISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEERIQ
CCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELMRREAEANRRPLPELVRAKIPFS
ACLQAFAEPDNVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPRKFDVS
IDMPDLLDISHLRARGLQPEEEELPDISPPIVIPDDSKDRLMNQLIDPSDIDESSVMQLA
EMGFPLEACRKAVYFTGNTGAEVAFNWIIVHMEEPDFAEPLSVPGYGGAGASVFGATGLD
NQPPEEIVAIITSMGFQRNQAVQALQATNHNLERALDWIFSHPGFEEDSDFVNEMENNAN
ANIMSEAKPEGPRVKDGSGMYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDHKVCAS
ERPPKDLGYMYFYRRIPS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccggggcgccctgttcagcgtgccgggcggcggcgggaagatggctgcagag
gacctgggcgagctgctggtgcctcacatgcccacgatccgcgtgcccaggtctggggac
cgagtctacaagaacgagtgcgccttctcctacgactccccgaactctgaaggtggactc
tatgtatgcatgaacacatttttggcctttggaagggaacacgttgaaagacattttcga
aaaactggacagagcgtgtacatgcacctgaagaggcacatgcgagagaaggtaagagga
gcctctggtggagctttacccaaaaggaggaattccaaaatatttttagatctagatctg
gatgacgatttaaatagtgacgattacgaatatgaagacgaagccaaacttgttatattc
ccagaccactatgaaatagcccttcctaacattgaggagttaccagccctggtaacaatt
gcttgtgatgcagtgctcagttcaaagtccccgtacaggaagcaggatccagatgcgtgg
gaaaatgagctgccagtgtcgaagtatgccaacaacctcgtccaactggagaacggggtc
aggattcctcccagtggctggaagtgtgcccaatgtgacctgcgggagaatctctggttg
aatctgactgacggctctattctgtgtgggaagtggttttttgacagctcagggggcaat
ggccatgcactggagcattacagagacatgggctatcctctggccgtgaagctgggcacc
atcacacctgatggggcagatgtttattcttttcaagaagagggacctgtttccgatcct
catttggccaaacacttagcacattttgggattgacatgcttcacacgcaagggacagag
aatgggctccgggacaatgacatcaagccgagagtcagcgagtgggaagtgatccaggag
tcagggactaagctgaagccgatgtacggcccagggtacacgggcctgaggaacctgggc
aacagttgctacctcagttctgtcatgcaggccatcttcagcatcccagagttccagaga
gcgtatgtagggaatctcccaaggatatttgactactcgccgttagatccaacgcaggac
ttcaacacacagatgactaagttgggacatggcctcctctctggccagtactcgaagcct
ccggtgaaatccgagctcattgaacaggtgatgaaggaggaacacaagcctcagcagaat
gggatctctccacgtatgttcaaggcctttgtcagcaagagccacccagaattctcctcc
aacaggcagcaggatgcccaggagtttttcttgcacttggtcaatctggtagagaggaat
cgcattggctcagaaaacccaagtgatgttttccggtttttggtggaggagcgaattcaa
tgctgtcagaccagaaaggtccgctacacggagagggtggactaccttatgcagttacct
gtggccatggaagcagcaaccaataaagatgagctgattgcctatgaactaatgcggagg
gaagcagaagccaacagaagaccccttcctgagctggtgcgagccaagatcccattcagt
gcctgccttcaggcctttgctgagcccgacaatgtggatgatttctggagcagcgccctg
caagccaagtctgcgggggtcaaaacatctcgctttgcctcattccctgaatacttggta
gtgcagataaagaagttcacttttggtcttgactgggttcccagaaaatttgatgtttct
attgatatgccagacctactagatatcagccatctcagagccagaggcttgcagccagag
gaagaggagcttcctgacatcagtccccccatagtcattcctgatgactcaaaagaccgc
ttgatgaaccagttgatagacccctcagacatagatgagtcctcggtgatgcagctggct
gagatgggcttccctttggaagcctgcaggaaggctgtgtacttcactgggaacactggg
gctgaggtggccttcaactggattatcgtgcacatggaggagcctgattttgctgaacca
ctgtccgtacctggctatggaggggctggggcctctgtctttggtgctactggactggac
aaccaacctcctgaggaaatcgtagctattatcacctccatgggattccagcgtaatcag
gcagtgcaggctctacaagcaacgaatcataacctggaaagagccctggactggatcttc
agccaccccggatttgaagaggacagtgactttgtgaacgagatggagaacaatgcgaac
gcgaatatcatgtctgaggccaagccagaggggcccagagtcaaggatgggtctggaatg
tacgagttgtttgcattcatcagtcacatgggaacatctacaatgagtggccattatgtt
tgccacatcaagaaggagggacgatgggtgatctacaatgaccacaaagtttgtgcctca
gaaaggccccctaaagacctgggatatatgtacttttaccgcaggataccaagctaa
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