Arvicanthis niloticus (African grass rat): 117706987
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Entry
117706987 CDS
T08817
Symbol
Lrrc7
Name
(RefSeq) leucine-rich repeat-containing protein 7 isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
anu04990
]
117706987 (Lrrc7)
Domain-containing proteins not elsewhere classified [BR:
anu04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
117706987 (Lrrc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_2
PDZ_6
LRR_13
LRR_5
LRR_EndoS
LRR_NXF1-5
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
117706987
NCBI-ProteinID:
XP_034356122
LinkDB
All DBs
Position
4:complement(133458531..133892951)
Genome browser
AA seq
1574 aa
AA seq
DB search
MESLIRGRNPPQYQRSPCKEARAALRKRPEEELQCLEMTTKRKLIGRLVPCRCFRGEEEI
ISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSS
LPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL
YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVL
DQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSN
MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHS
LRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNL
PFSFTKLKELAALWLSDNQSKALIPLQTEAHPETKQRVLTNYMFPQQPRGDEDFQSDSDS
FNPTLWEEQRQQRMTVAFEFEDKKEDDESAGKVKALSCQAPWDRGQRGITLQPARLSGDC
CTPWARCDQQIQDMPVPQSDPQLAWGCISGLQQERSMCAPLPVAAQSTTLPSLSGRQVEI
NLKRYPTPYPEDLKNMVKSVQNLVGKPSHGVRVENSNPTANTEQTVKEKFEHKWPVAPKE
ITVEDSFVHPANEMRIGELHPSLAETPLYPPKLVLLGKDKKESTDESEVDKTHCLNNSVS
SGTYSDYSPSQASSASSNTRVKMGSLQTTSKDAVHNSLWGNRIAPPFPQPLDAKPLLSQR
EAVPPGNLPQRPDRLPMSDAFPDNWTDGSHYDNTGFVSEEATGENANNNPLLSSKARSVP
AHGRRPLIRQERIVGVPLELEQSTHRHTPETEVPPSNPWQNWTRTPSPFEDRTAFPSKLE
TTPTTSPLPERKDHMKESTETPGPFSPGVPWEYHDPTPNRSLGNVFSQIHCRPDSSKGVI
AISKSTERLSPLMKDIKSNKFKKSQSIDEIDVGTYKVYNIPLENYASGSDHLGSHERPDK
FLGPEHGMSSMSRSQSVPMLDDEMLMYGSSKGPPQQKASMTKKVYQFDQSFNPQGAVEVK
AEKRIPPPFAHNSEYIQQPSKNIAKDLVSPRAYRGYPPMEQMFSFSQPSVNEDAMVNAQF
ASQGPRAGFLRRADSLASSTEMAMFRRVSEPHELPPGDRYGRAAYRGGLEGQSSVSMTDP
QFLKRNGRYEDEHPSYQEVKAQAGSFPAKNLTQRRPLSARSYSTESYGASQTRPVSARPT
MAALLEKIPSDYNLGNYGDKTSDNSDIKTRPTPVKGEESCGKMPADWRQQLLRHIEARRL
DRNAAYKHNTVNLGMLPYGGISAMHAGRSMTLNLQTKSKFDLQDLPLQKTPSQQSNILDN
GQEDVSPSGQWNPYPLGRRDVPPDTITKKAGSHIQTLMGSQSLQHRSREQQPYEGNINKV
TIQQFQSPLPIQIPSSQATRGPQPGRCLIQTKGQRSMDGYPEQFCVRIEKNPGLGFSISG
GISGQGNPFKPSDKGIFVTRVQPDGPASNLLQPGDKILQANGHSFVHMEHEKAVLLLKSF
QNTVDLVIQRELTV
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atggagagcctaatacggggaaggaatcccccacaatatcagagaagtccttgtaaggag
gctcgtgcagcacttcggaagaggccagaagaggagttgcagtgcctggagatgaccacc
aaacggaagctcattggccgcctcgtgccatgccgctgcttccgaggcgaggaagagatc
atctcagtgttggattactcccactgcagcctgcaacaggtgcccaaggaggtcttcaac
ttcgaacggacactagaagagctatatctggatgccaatcagattgaggagctgccaaag
caattattcaactgtcaagctctacggaaactaagcattcctgataatgacctctcaagt
ctgccgacctccattgctagcctagttaatctgaaagaactcgacatcagtaaaaacggt
gtacaagaatttccagaaaacataaagtgctgtaagtgtttaaccattattgaagccagt
gtcaatcccatttctaaactacccgatggcttcacgcagcttcttaacctgacccagctc
tacctgaatgacgccttccttgaatttcttccagctaattttggaagacttgtcaaattg
cgaatcttggagttaagagaaaatcacttgaaaactctaccaaagtcaatgcacaagctg
gcccagctggaaagacttgacctaggcaataatgaattcagcgagctgcctgaagttctg
gatcaaatacagaatttgagggagctttggatggataacaatgcattgcaagtgctgcct
gggtctatagggaagttaaagatgttggtatacctggatatgtcaaaaaacaggatagaa
acagttgacatggatatttctggatgtgaagccctcgaggacctcttactatcatccaat
atgttgcaacagctgcctgactcaataggattgctgaaaaagttaacaactctaaaagta
gatgacaatcaacttacaatgctacccaacacaatcggaaacttatctttattagaagaa
tttgactgcagctgcaatgagttggagtccctccctcccaccattggttacctgcacagc
ctgcgaaccttagcagtcgatgagaatttcctcccagagttgcccagagaaattggaagc
tgtaagaatgtcaccgttatgtctctacgctccaataagctagaatttcttcctgaagaa
attgggcagatgcagagactgcgtgtcttaaatctaagtgataataggttgaagaacttg
ccattctccttcaccaaactcaaagaacttgcagcattgtggctttctgacaatcagtcc
aaggcccttatccctctgcaaacagaagcccatccagaaactaagcaaagagtactgacc
aactacatgtttccccagcagccccgtggtgatgaagatttccagtcagacagcgacagc
ttcaaccccaccctgtgggaggagcagagacaacagcgcatgactgttgcctttgaattt
gaggataaaaaagaagatgacgaaagtgctgggaaagttaaggctctctcctgccaagcc
ccctgggacaggggccagcgtgggattactctccaacctgccaggctgtctggcgattgc
tgcacaccatgggccaggtgtgatcagcagatccaagatatgcccgtcccccagagtgac
ccccagctggcatggggttgtataagtggcctccagcaggagaggagcatgtgtgctcca
ttgccagtggcagcacaatccaccactcttccctctctaagtggcagacaggttgaaata
aacctaaaacgatatccaactccttacccagaggatttaaagaatatggtaaaatctgtt
caaaatctggtgggtaagccaagccatggagtgcgtgttgagaactcaaatccaacagct
aacacggagcaaactgtgaaagaaaagtttgaacacaagtggccggtggccccaaaggag
attacagtggaggattcttttgttcatccagctaatgaaatgaggattggggaacttcac
ccttcattagctgagacccctctgtacccacccaaacttgttcttctagggaaggacaaa
aaagaatcaactgatgagtctgaagttgacaaaactcactgtctgaataacagtgtctcc
tcaggcacctactcagactactcgccctcccaagcttcctcggcatcctctaacacccgg
gtgaaaatggggtccttgcagacaacatctaaagatgccgtccataactctttgtggggt
aacaggattgcaccacctttcccacagcctctagatgcaaagccattactcagccaacgc
gaggctgtccctccagggaacctcccccagcgtcccgatcggctgccaatgagtgatgct
ttccctgacaactggaccgatggctcccattatgacaacacaggttttgtctccgaggaa
gccacaggcgagaatgccaacaataaccctctcctaagctccaaggctagaagcgtacct
gctcatgggcgcaggcctttaatcaggcaagagaggattgtcggcgttcccctggaactg
gaacaatccacacacagacacacaccagaaacagaagtgcctccttccaatccctggcag
aattggaccagaacccccagtccatttgaagacaggactgcttttccttccaaattagaa
acaacccctactaccagtcccttgcctgaaagaaaagaccacatgaaggagtctacagag
acaccaggtcctttctctccaggagtgccatgggagtaccacgaccccacccccaacagg
agtctcggtaatgtcttttcgcaaatccactgccgcccagattcgtctaaaggtgttatt
gcaattagcaaaagcacagagaggctttccccgctcatgaaagatataaagtccaacaag
ttcaaaaagtcccagagtattgatgagattgacgtcggtacctacaaggtctataacatt
ccactagaaaactatgcctctggaagtgatcacttaggaagccacgagcggccagacaag
ttcttgggaccagagcatggcatgtccagtatgtccaggagccagtcggtacccatgctg
gatgacgagatgctcatgtatggaagtagtaaaggcccaccccaacaaaaagcatctatg
actaagaaggtctatcagtttgaccaaagcttcaatccacaaggagcggtggaagtaaaa
gcagagaagaggattccacccccttttgcacacaattctgagtatatacagcagcccagt
aaaaacatcgccaaggatctggtcagccccagagcctatagaggatacccacctatggag
cagatgttttccttttcccagccatctgtaaatgaggatgccatggtgaatgctcaattt
gccagccaggggcccagggcaggcttcctaaggagggctgactccctggccagctccact
gagatggccatgttcagaagagtcagtgagccccacgagctgccccctggtgacaggtat
ggcagagcagcctataggggagggctggaaggccagagcagcgtttcaatgactgatccc
caattcctcaagaggaatggcaggtacgaagatgagcacccttcatatcaagaagtgaaa
gcgcaggcgggaagttttcctgctaaaaaccttacccagaggaggccgctgtctgccagg
agctacagcacagagagttacggggcctcccaaaccaggccagtttcagctaggcctacc
atggcagccctcctggaaaaaataccatctgactataacttgggtaactatggtgacaag
acatcagataacagtgatataaagacaaggcccacccctgtgaagggagaggagagctgt
ggcaaaatgccggcagactggagacagcagctgcttagacatatagaagctagaaggtta
gacaggaacgctgcttacaaacacaacacagttaaccttggcatgctgccctatggaggt
atttcagcaatgcatgcaggcagaagcatgactttaaacttgcagactaagtctaaattt
gaccttcaagacctacctcttcagaaaaccccgtcccagcaaagcaacattttagacaat
ggacaagaagatgtctctcctagtggccaatggaatccttacccacttgggaggcgggat
gtacctccggacaccattactaaaaaggcaggcagccacattcagaccttgatggggtca
cagagccttcagcaccgcagccgggagcagcagccatatgaagggaacatcaacaaagtg
accattcagcagtttcagtcaccattgcccatccagatcccctcatcacaagccacccgg
ggacctcagcctggacggtgcttaattcaaacgaaagggcagaggagcatggacggttat
cctgaacagttctgtgtgagaatagaaaagaaccctgggcttggatttagtatcagcggt
ggaattagtgggcaaggaaatcctttcaaaccttctgacaagggtatctttgttactagg
gttcagcctgacggaccagcatccaacctactacagcccggggataaaattcttcaggca
aatggacacagttttgtgcatatggaacatgaaaaggctgttttactactgaagagcttc
cagaacacagtagacctagttatccaacgtgagctcactgtctaa
DBGET
integrated database retrieval system
