Arvicanthis niloticus (African grass rat): 117707067
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Entry
117707067 CDS
T08817
Symbol
Pcdh10
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117707067 (Pcdh10)
Cell adhesion molecules [BR:
anu04515
]
Cadherins
Protocadherins
117707067 (Pcdh10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
117707067
NCBI-ProteinID:
XP_034356297
EnsemblRapid:
ENSANLG00005004497
LinkDB
All DBs
Position
4:29447832..29504614
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AA seq
1057 aa
AA seq
DB search
MIVLLFFALLWMVDGVFSQLHYTVQEEQEHGTFVGNIAEDLGLDITKLSARRFQTVANSR
TPYLDLNLETGVLYVNEKIDREQICKQSPSCVLHLEVFLENPLELFRVEIEVLDINDNPP
SFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRDYEITPNSYFSLDVQTQGDGNRF
AELVLEKPLDREQQAVHRYVLTAVDGGGGGGGGEGGGGGGGAGLPPQQQRTGTALLTIRV
LDSNDNVPAFDQPVYTVSLPENSPPGTLVIQLNATDPDEGQNGEVVYSFSSHISPRAREL
FGLSPRTGRLEVSGELDYEESPVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISF
STVKEAVSEGAAPGTVVALFSVTDRDSEENGQVQCELLGDVPFRLKSSFKNYYTIVTEAP
LDREAGDSYTLTVVARDRGEPSLSTSKSIQVQVSDVNDNAPRFSQPVYDVYVTENNVPGA
YIYAVSATDRDEGANAKLTYSILECQIQGMSVFTYVSINSDNGYLYALRSFDYEQIKDFS
FQVEARDAGSPQALTGNATVNILIVDQNDNAPAIVAPLPGRNGTPAREVLPRSAEPGYLL
TRVAAVDADDGENARLTYSIVRGNEMNLFRLDWRTGELRTARRVPAKRDPQRPYELVIEV
RDHGQPPLSSTATLVVQLVDGAVEPLGGGGDRGGGSGEHLRPSRSGGGETSLDLTLILII
ALGSVSFIFLLAMIVLAVRCQKEKKLNIYTCLASDCCLCCCCCGNGSSTCCGRQARARKK
KLSKSDIMLVQSANVPSNPAQVPVEESGGFGSHHHNQNYCYQVCLTPESAKTDLMFLKPC
SPSRSTDAEHNPCGAIVTGYSDQQPDIISNGSILSNENKHQRAELSYLVDRPRRVNSSAF
QEADIVSSKDSGHGDSEQGDSDHDVTNRGQSAGMDLFSNCTEECKALGHSDRCWMPSFVP
SDGRQAADYRSNLHVPGMDSVPDTEVFEPPEIQPGAERSFSTFGKEKALHGTLERKELDG
LLSNTRAPYKPPYLKMLWMQLRGEAHLTKDGGKQTTT
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctgttattctttgctttgctctggatggtggacggagtcttttcccagctt
cattatactgtgcaggaggagcaggaacatggcactttcgtggggaatatcgctgaagac
ctgggcttggacattacaaaactttcagctcgcaggtttcagacggtggccaactcacgg
accccttacttggacctcaatctggagaccggggttctgtacgtaaacgaaaagatagat
cgcgagcagatctgtaagcagagcccctcttgtgtcctgcacctggaagtctttctggag
aacccgctggagctgttccgagtggagatcgaagtgctggacatcaatgacaaccctccc
tccttcccagagcccgacctgacagtggagatctcagagagcgctacaccaggcacccgc
tttcccttggagagcgccttcgacccagacgtggggaccaactccttgcgagactacgag
ataaccccaaatagctacttctcgctagacgtacagacccagggagatggcaaccgattc
gccgagctggtcctggagaagccactggaccgagaacagcaagcggtgcaccgctacgtg
ctgaccgcggtggacgggggaggagggggaggaggaggggaaggagggggaggcggtggg
ggagctggcctgcccccccagcagcagcgtactggcacggccttgctcaccatccgagtg
ctcgactccaacgacaatgtgcccgcgtttgaccaacccgtctacactgtttccctacca
gagaattctccccctggcacgctggtgattcagcttaatgccaccgaccctgatgaaggc
cagaacggcgaggtcgtgtactcgttcagtagtcacatttcgcccagggctcgggagctc
ttcggactgtcgccgcgcacgggccggctggaggtgagcggcgagctggactatgaagag
agcccagtgtaccaggtgtatgtccaagccaaggacttgggtcccaatgccgtgcctgcg
cactgcaaggttctggtgagagtgctggatgccaacgacaacgcaccagagatcagtttc
agcacagtgaaagaggcggtgagcgagggtgcggcccctggcacggtggtggctctgttc
agcgtgaccgatcgggactctgaggagaacgggcaggtgcagtgtgagctgctgggagac
gtgccgttccgcctcaagtcttccttcaagaattactacactatcgtgacggaagctccc
ttggaccgagaggctggggactcctacactctgaccgtggtggcccgcgaccggggagag
ccttcactctccaccagtaagtcgattcaggttcaagtgtcagatgtgaatgacaatgcg
ccgcgcttcagccagccggtctacgacgtgtatgtgacagaaaataatgtgccgggtgcc
tacatttatgcggtgagcgccacggaccgcgacgaaggggccaatgcaaaattaacctac
tctatcctagagtgccagatccagggaatgagcgtcttcacctacgtgtccatcaactca
gacaacggctacttgtacgccctgagatccttcgactatgagcagatcaaggacttcagc
tttcaagtggaagcccgcgacgcgggcagtccccaagcgctgaccggcaatgccacggtc
aacatcctgatagtggatcagaatgacaacgcccccgccatcgtggcgccccttccggga
cgcaatgggactccagcccgcgaggtgctgccgcgctctgcggaacccggctacctgctc
actcgtgtggccgcagtggacgcggacgacggcgagaacgccaggctcacctacagcata
gtgcggggcaacgaaatgaacctattccgactggactggcgcaccggagagctccgcacc
gcgcgccgggtcccagccaagcgcgacccccagcggccttatgagctggtgatcgaggtg
cgcgaccacgggcagccgcccctgtcctcaacagccaccctggtggttcagctggtggat
ggagcggtagagcccctgggcgggggcggggaccgaggcggagggtccggggaacacctg
cgccccagccgctctggaggcggggaaacgtcactggacctcacactcatcctcatcatc
gcactgggctccgtgtccttcatcttcctgctggccatgatcgtattggccgtgcgctgt
caaaaagagaaaaaactcaacatctacacgtgtctcgcgagtgattgctgcctctgctgc
tgctgctgcggaaatgggagctccacctgctgcggccgccaagcccgggcgcgcaagaag
aaactcagcaagtcagatatcatgttggtgcagagcgccaatgtccctagcaacccggcc
caggtgccggtggaggagtccggaggcttcggttcccatcaccacaaccagaactattgc
tatcaggtctgcctcaccccggagtccgccaagaccgacctgatgttcctgaagccctgc
agcccttcccggagtacagacgctgaacacaatccctgcggagccatcgtcaccgggtac
agcgaccagcaaccagacatcatttccaacggaagcattttgtccaacgagaataaacac
cagcgagcagagctcagctatctagttgacagacctcgccgagttaacagttctgcattc
caggaagctgacatagtaagctctaaggacagcggccatggagacagtgaacagggagat
agtgatcatgacgtcaccaaccgtggccagtcagctggtatggatctcttctccaactgc
actgaggaatgtaaagccctgggccactctgaccgatgctggatgccttcttttgtccct
tcggatggacgccaggctgcggattaccgcagcaacctgcatgtccccggcatggactct
gttccagacaccgaggtcttcgaacctcctgaaatccagcctggggcagagcgttccttc
tccactttcggcaaagagaaggccctacatggcactctggagaggaaggagctggacgga
ttgctgtctaatacacgagcgccttacaaaccaccatatttgaaaatgctgtggatgcag
ctgcgtggagaggctcatttgacgaaagatggaggcaagcaaacaaccacatga
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integrated database retrieval system
