Arvicanthis niloticus (African grass rat): 117707106
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Entry
117707106 CDS
T08817
Symbol
Itga10
Name
(RefSeq) integrin alpha-10 isoform X1
KO
K06586
integrin alpha 10
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04151
PI3K-Akt signaling pathway
anu04510
Focal adhesion
anu04512
ECM-receptor interaction
anu04810
Regulation of actin cytoskeleton
anu04820
Cytoskeleton in muscle cells
anu05165
Human papillomavirus infection
anu05410
Hypertrophic cardiomyopathy
anu05412
Arrhythmogenic right ventricular cardiomyopathy
anu05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
117707106 (Itga10)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117707106 (Itga10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117707106 (Itga10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117707106 (Itga10)
04810 Regulation of actin cytoskeleton
117707106 (Itga10)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
117707106 (Itga10)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
117707106 (Itga10)
05412 Arrhythmogenic right ventricular cardiomyopathy
117707106 (Itga10)
05414 Dilated cardiomyopathy
117707106 (Itga10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117707106 (Itga10)
Cell adhesion molecules [BR:
anu04515
]
Integrins
Integrin alpha subunits
117707106 (Itga10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
Integrin_A_Ig_3
FG-GAP_3
ITGAX-like_Ig_3
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
117707106
NCBI-ProteinID:
XP_034356361
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Position
4:76112575..76129438
Genome browser
AA seq
1166 aa
AA seq
DB search
MEPLSIPHLFLPLALLTGLCSPFNLDEHHPRLFTGPPEAEFGYSVLQHVGGGQRWMLVGA
PWDGPSGDRRGDVYRCSIGGFHSAPCTKGHLGDYQLGNSSQPAVNMHLGMSLLETDADGG
FMACAPLWSRACGSSVFSSGICARVDASFRPQGSLAPTAQRCPTYMDVVIVLDGSNSIYP
WSEVQTFLRRLVGRLFIDPEQIQVGLVQYGETPVHEWSLGDFRTKEEVVRAARNLSRREG
RETRTAQAIMVACTEGFSQSRGGRPEAARLLVVVTDGESHDGEELPAALKACDAGKVTRY
GIAVLGHYLRRQRDPSSFLREIRAIASDPDERFFFNVTDEAALTDIVDALGDRIFGLEGS
RGENESSFGLEMSEIGFSIHRLQDGILFGMVGAYDWVGSVLWLEEGRRLFPPPTALEDEF
PPALQNHAAYLGYSVSSMLLPGGRRLFLSGAPRFRHRGKVIAFQLKKDGVVRVAQSLQGD
QIGSYFGSELCPLDTDRDGITNILLVAAPMFLGPQNKETGRVYVYVVGQQNLLMLQGTLQ
PDRSQDSRFGFAMAALPDLNHDGFTDVAVGAPLEDGHQGALYLYHGTQTGIRPHPTQRIA
AVSMPQALRYFGRSVDGRLDLDGDDLVDVAVGAHGAAILFSSQPIIHLIPTLDVIPPHIS
VVQKDCKRRGQEAACLTAALCFQVLSQTPGRWDRRFYIRFSASLDEWTTGARAAFDGSGQ
RLSSRQLQLSVGNVTCEQLHFHALDTSDYLRPVALTVTFALDNTTKPGPVLAEGSSTSIR
KLIPFSKDCGPDNECITDLVLQADMDIRGSRKSPYVVHGGRQKVLVSVTLENKKENAYNT
SLSLSFSRNLHLASLTPQRAKSVKVECAVPSPHARLCIVGHPVFQAGAKVTFLLEFEFSC
TFLLSQVFVRLTARSSSLERNETLQDNTAQTSAYIRYEPHLVFSSESTLHRYEVHPYRTL
PVGPGPEFKTTLRVQNLGCHVVSGLVISALLPAVAHGGNYFLSLSQVISGNASCTVQNLT
EPPGFPVHPEELQHTSRLNGSNTRCQVVRCHLGLLAKGTEISVGLLRLVHNEFFRRAKFK
SVTVVSTFKLGTEEGSVLLLNEASRWSESHLEVIQTLPTLISLWILVGSVLGGLLLLALL
VFCLWKLGFFTRKKIPKEQSEEKLEQ
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggagcccctctccatccctcacctgttcttgcccctggcgttgctgacaggtctctgc
tccccctttaatctggacgagcatcacccacgcctcttcacagggccaccagaggccgaa
ttcggatacagtgtcttacagcatgttgggggtggacagcgatggatgctggtgggcgcc
ccgtgggatgggccttcaggtgaccggaggggggatgtttatcgttgctctataggggga
ttccacagtgctccatgtaccaaaggccacctgggtgactatcaactgggaaattcctct
cagcctgctgtgaacatgcacctggggatgtctctactagagacagatgctgatggggga
ttcatggcctgtgcccctctctggtctcgtgcctgtggcagctctgtcttcagttctgga
atatgtgcccgtgtggatgcttcattccggccccagggaagcctggcacccaccgcccaa
cgctgtcctacatacatggatgtcgtcattgttttggatggctccaatagtatctatccc
tggtcagaagttcagactttccttcggaggctggtaggaagactgtttatcgatccagaa
cagatacaggtaggactggtacagtacggggagacccctgtgcacgagtggtccctggga
gacttccgaacaaaggaggaagttgtgagggcagcaaggaacctcagtcggagggagggg
cgagaaacgagaaccgcccaagcaataatggtggcatgcacagaagggttcagtcagtcg
agggggggcagaccagaggccgctcggctgctggtagttgtcactgatggagagtcccat
gatggagaagagcttccagcagcactaaaggcctgtgacgctggaaaagtgacacgttac
gggattgcggtccttggtcactatctccggcgacagagagaccccagctcttttcttcga
gaaatcagagctattgctagtgatccggatgaacgattcttcttcaatgtcacagatgag
gctgcactgacggacattgtggatgcactgggagaccggatttttggtcttgaagggtcc
cgtggagaaaatgaaagctcctttgggctagaaatgtctgagatcggcttctccatccac
cggctacaggatgggattctctttgggatggtgggggcctatgactgggtgggctccgtg
ctatggcttgaagaaggtcgccgccttttccccccaccaactgccctggaagatgagttt
ccccctgcattgcagaaccacgcagcttacctgggttactctgtttcctccatgcttctg
cctggtggacgcaggctctttctctcgggggcaccgaggtttagacatcgaggaaaagtt
atcgctttccagctaaagaaagatggggttgtgagggtcgcccagagcctccagggggat
cagatcggctcatactttggcagcgagctctgcccattggatacagatagggatgggata
actaatatcttacttgtggcggctcccatgttcctgggtccccagaacaaggagactgga
cgcgtttatgtatacgtggtgggccagcaaaatttgctgatgctccaaggaacgcttcag
ccagaccgctcccaggattctcggtttggctttgccatggctgctcttcctgacctgaac
catgacggtttcactgatgtagcagtgggggcacccctggaggatggacaccagggagca
ctgtacctgtatcatggaacccagactggaatcaggccacatcctacccagaggattgct
gctgtctccatgcctcaggccctccgatacttcggccgaagtgtagatggccggttagat
ctggatggagatgatctcgtggatgtggctgtgggtgcccatggggcagccattctgttc
agttcccagcccatcatccacctgattccaaccctcgatgtgatacctccgcacatcagt
gtggttcagaaggactgtaagcgacggggccaggaagcagcctgtctgaccgcagccctt
tgcttccaagtgctgtctcaaactcctgggcgttgggatcgcagattctacatacggttc
tcagcatcactggatgagtggaccactggggcacgtgcagcattcgatggctctggccag
cggctgtcctctcggcagctccagctcagtgttgggaatgtcacttgtgaacagctgcac
ttccatgcactggatacgtcggattacctccggccagtggccttgactgtgacttttgct
ttggacaacaccacgaagccagggcctgtgctggctgagggatcctctacgtctatacga
aagctgattcccttctcaaaggactgtggccctgacaatgaatgtatcacagacctggtg
cttcaagctgacatggacatcagaggctccaggaagtccccatatgtggttcacggtggc
cgacagaaagtgctggtgtcagtgaccctggagaacaagaaggagaatgcctacaacact
agtctgagtctcagcttctccagaaacctccacctggccagtcttactcctcagagggcc
aagtcagtgaaggtggagtgcgcagtcccttccccccatgcccggctctgcatcgtgggg
catccggtcttccaggctggggccaaggtgaccttcctgttggagtttgaatttagctgc
accttcctcctgagccaggtctttgtgaggctgactgccaggagcagtagcctggagaga
aatgagacccttcaagataacacagctcagacctctgcctacatccgatatgaacctcac
ctcgtgttctctagtgagtccactctgcatcggtatgaggttcacccttacaggactctc
ccagtgggtcctggccctgaattcaaaaccactcttagggttcagaaccttggttgccat
gtggtcagtggtcttgtcatctctgccctccttccagctgtagcccatgggggtaactac
ttcctgtcactatctcaagtcatctctggcaatgcaagctgcacagtgcagaacctgact
gagcccccaggattccctgtgcatccagaggagcttcagcacacaagcagactgaacgga
agtaacactaggtgtcaggtggtgaggtgtcaccttggactgctggcaaaggggactgag
atctctgtcggactgctgaggctggttcacaatgaattcttccggagggcaaagttcaag
tctgtgacagtggtcagtaccttcaagttaggaactgaggagggcagtgtcctactgctg
aatgaagcctcccgctggagtgagagccacttggaggtgattcagaccctccctaccctc
atctccctgtggatcctcgtgggcagtgtcctgggagggctgctcctgcttgctctcctt
gtcttctgcctgtggaagcttggtttctttacccgtaagaaaatccccaaagaacaaagt
gaagagaagttggagcagtaa
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