Arvicanthis niloticus (African grass rat): 117707311
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Entry
117707311 CDS
T08817
Symbol
Fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00900
Terpenoid backbone biosynthesis
anu01100
Metabolic pathways
anu05164
Influenza A
anu05166
Human T-cell leukemia virus 1 infection
Module
anu_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117707311 (Fdps)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
117707311 (Fdps)
05164 Influenza A
117707311 (Fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
anu01006
]
117707311 (Fdps)
Enzymes [BR:
anu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
117707311 (Fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
117707311 (Fdps)
Prenyltransferases [BR:
anu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
117707311 (Fdps)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
117707311
NCBI-ProteinID:
XP_034356662
LinkDB
All DBs
Position
4:complement(68509903..68518987)
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AA seq
420 aa
AA seq
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MPLSRWLRSLGVFLLSAPCWAPRERWLGYLQRPSLAYGCPVRGAWHSARWWCQVWTEEPR
AFSSSVRMNGNQNLDVYNQEKQNFIQHFSQIVKVLTEDELGHPETGDAITRLKEVLEYNV
VGGKYNRGLTVVQAFQELVEPRKQDAESLQRALTVGWCVELLQAFFLVSDDIMDSSLTRR
GQICWYQKPGIGLDAINDALLLEASIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTL
DLITAPQGHVDLGRYTEKRYKSIVKYKTSFYSFYLPIAAAMYMAGIDGEKEHANARKILM
EMGEFFQVQDDYLDLFGDPSVTGKVGTDIQDNKCSWLVVQCLLRATPQQRQILEENYGQK
DPEKVARVKALYEALDLQTVFFKYEEDSYNRLKSLIEQCSAPLPPSIFLELANKIYKRRK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgtcccgctggctgagatctctgggggtcttcctgctgtcagccccctgctgg
gcaccccgggagaggtggcttggttacctacaacgaccctccctggcatatgggtgtcca
gtccggggggcctggcacagtgcccgctggtggtgccaagtgtggacagaggagcctcga
gcatttagctcctctgtcagaatgaatgggaaccagaatttggatgtttataaccaagaa
aagcagaatttcatccagcacttctcccaaatcgtcaaggtgctgactgaggatgagctg
ggacacccagagacaggggatgctattacccggctcaaggaggtcctggagtacaatgtg
gtaggaggcaagtacaaccggggtttgaccgtggtacaggccttccaggagctggtggag
ccgaggaaacaggatgctgagagtctccagcgggccctgactgtgggctggtgtgtggaa
ctgctccaggctttcttcctcgtgtcagacgacatcatggactcttccctcactcgccgg
gggcagatctgctggtatcagaagccaggcataggcttggatgccatcaatgatgctctg
cttctggaagcctccatctaccgcctgctgaagttctactgcagggagcaaccctactac
ctgaacctgctggagctctttctgcagagttcctatcagactgagattgggcagactcta
gacctcatcacggcaccccagggccacgtggatcttggtagatacactgaaaagaggtac
aaatctattgtcaagtacaagacatcattctactctttctacctgcccatcgctgctgcc
atgtacatggcaggcatcgatggggagaaggaacatgccaatgcccggaagatcctgatg
gagatgggcgaattctttcaggtccaggatgactacctcgatctctttggagaccccagt
gtgactggaaaggtcggcactgacattcaggacaacaaatgcagctggctagtggttcag
tgtctgctacgagccactcctcaacagcgccagatcttagaggagaattatggtcagaaa
gatccagaaaaagtggcgcgggtgaaagcactgtatgaggcgctggatctgcagactgtg
ttcttcaagtacgaggaagacagttacaaccgcctcaagagtctcatcgagcagtgctct
gcgcccctgcccccatccatcttcttggaactagcaaacaagatctacaagcggagaaag
tga
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