Arvicanthis niloticus (African grass rat): 117707339
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Entry
117707339 CDS
T08817
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117707339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117707339
03036 Chromosome and associated proteins [BR:
anu03036
]
117707339
Transcription factors [BR:
anu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
117707339
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
117707339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
117707339
NCBI-ProteinID:
XP_034356675
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Position
4:52752502..52756935
Genome browser
AA seq
1283 aa
AA seq
DB search
MEALTRTRGKVNSSGNNSDMMKNSKRETIISERSVSLRLTRSKRKRKYVESNNEKPMAEN
RNVKATHGNSENNIFMPNSPRVSVIVQPYPLLNEDRNDFNGTEFKSNSYMKTKNLHRRSF
RFNGVVSCTACGQQVNHFQKGSFYRHPSLKVLICKKCFKYYMSDNISCDSNGLDEQCRWC
AEGGNLVCCDFCHNAFCKKCIQYNLGRKELSTIMEERNQWHCFVCHPAPLLNLVTACDSI
FENLEQLQQKNKKRKVVTKKSSNLGDYSRTFSAKKSSFSYNGEKTKLVEPCSDSVVCTYS
ALTVSKEIIKKTKKLIDTTSNTSFRYINFLKQAADNSEMSSAMKLYQLKSFQSVLADIKK
AHLELEDDLNSEIQALDAISKKKCTKELKIRNTKSETKIQKRGKSCSSEEKGVLQLDARP
TIKNTVSKHFPEDNQKINNNGDQKGLSREEGPQYKLTNTSEILDMDIVPVSSSVPEDIFE
NFEIAKGVQSSSDYEGDGSRGTELKLESSPPKFKTSSKDSRRNIKSKITAKLSKGLYVKL
TPISLYNYPTKGADCQEVPQEKDVSKSSGLALFSKKCGAKEEINEHEHLAENNVPLSLEE
ADLQRSLHVKTKPWSQQREAKPLISNSDEESNKLVKEKQKLSVLVRKKDKQNSATAIDTP
TLHKVPKAKRARIVDQSSDSDETLSVFTELRHMGHSSLDNSSNQIQIIHKIQKGKDIDAK
RKCKSSISRSDFGIKKGKPSKNSIISKEKCQNHSESSNSDSWLEREVNVISKIGTDRVTK
KSISYQKDHDAFEDEKQSKIVADAKKLERMNTTQEIASDDTEGNQGENFFYTSDDSFKKG
KNMKQLRDMLYKSEQPKISSVATKENAKFLEDKSKEKLPGSVEQLLGERDRFDLSEDKKS
TCRFSHREKSSQKKPDYLSSVTENNLLKGECLDSPTKRLKSIDLRKRRNLNSRRNVNESG
SSSSDTEESKENNKKQKKQRTSSQKKTGNAKEKKRNSLITVTKKMPGDITFSFLDNAEDA
HSSVSEGRSDEQKIKPLTDKVMKPSHNRFCQSLRDGVLSRSVPVIDVKDDTDSDLENRIA
KLMLLEEIKASVFSDEDSSSDDESXQEKNGXTRQQEEENLGDEAVPNQVNSKSDLCFEQF
TKPGHRQRXLNYKLTMKNGKWKRKSTMYKEHXEANGRNERKMSIEDLEYTNFQESVIVEE
VSESEDGQQPTTKSTQKVELEKGQWDYPTERXQKHSHSENERPSKEKLVKEAERVXVKDE
SKSPKNGRMEIWKVLKVDKLREK
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgttgacaaggaccagaggtaaagtcaatagttctggaaataattctgatatg
atgaaaaatagcaaacgggaaactatcatctcagaaaggagtgtatccttaagattgaca
cgatcaaagagaaaacgaaaatacgtagaatctaataacgaaaaacctatggcagagaat
agaaatgtaaaagctactcatgggaactcagaaaataatatttttatgccaaattcaccc
agagtttcagtaattgtacagccatacccattgctgaatgaagacaggaatgattttaat
gggactgagtttaaaagcaatagttacatgaaaacgaaaaacctccatagacgcagcttc
agatttaatggggtcgtgagctgtactgcttgtggacaacaggtcaatcattttcaaaaa
ggttccttttatagacacccttccctgaaagtgcttatctgtaagaagtgctttaagtac
tacatgagtgataatattagctgtgactccaatggtctggatgaacaatgtcggtggtgt
gcagaaggtgggaacttggtttgttgtgacttttgccataatgccttctgtaagaaatgc
atccagtacaaccttggtcggaaagagttatctacaataatggaagaaaggaatcaatgg
cattgctttgtttgtcacccagcacctctactgaacttggtcactgcatgtgacagcata
tttgagaatttagaacagctgcagcaaaaaaataagaagagaaaagttgtcactaaaaaa
agtagtaacctaggtgactattcacgtacattttcagcaaagaagagtagtttcagttat
aatggagaaaaaacaaaattagtcgagccgtgttctgattctgtagtctgcacttattca
gcactaactgtatccaaagaaattattaagaagaccaaaaaactgattgacacaacatct
aacacaagcttcagatatattaattttctaaagcaagcagcagataattcagaaatgagt
tctgctatgaagttatatcagcttaagtcttttcaatctgtgttagctgatatcaagaag
gctcatcttgaattagaagatgacttaaattcagagattcaagctttggatgctataagc
aaaaagaaatgtaccaaagagcttaaaatcagaaacactaaatcagaaacaaaaatacaa
aaaagggggaaatcctgttcttccgaagagaaaggtgtcttacagttggatgctagacca
acaataaagaacacagtcagcaagcactttccagaagacaatcagaaaataaacaacaat
ggtgaccagaagggattgagtagggaagaaggacctcagtacaaactcactaacacttct
gaaatcttagacatggatattgtgcctgtatcttcctcagttccagaagacatttttgag
aattttgagattgctaaaggagttcagagttcatctgattatgaaggagatggcagcagg
gggactgagctgaaactggagagttcacctccaaaatttaaaacttcttcaaaagacagc
agaagaaatattaagtcaaaaattacagcaaaattaagcaaaggattatatgttaaactc
accccaatttccctttataattacccaactaaaggtgctgactgccaagaagttccacaa
gagaaagatgtcagtaaaagttctggcctggccctcttttcaaagaaatgtggagctaaa
gaagaaattaatgagcatgagcatttggctgaaaataatgttccattatccttagaagaa
gctgatcttcaaagatccctacatgtgaaaaccaagccctggagtcaacaaagggaagcc
aaacctttaatatcaaattcagatgaagaaagtaacaaactagttaaagagaagcaaaag
ctgtcagttctggtaagaaaaaaggataagcaaaattctgctactgctattgatacgcct
acacttcataaggtgcccaaagctaaacgagcaaggattgtagatcaaagttcagattct
gatgaaactctatcagtcttcacagagttaagacacatgggtcactcttccttagacaat
agcagtaatcaaatacagataattcataaaattcaaaaagggaaagatattgatgcaaaa
agaaaatgcaaaagttctatttccaggtcagattttggtatcaaaaaaggaaagccatct
aaaaattctataatctctaaagagaaatgtcaaaatcactctgagtcttcaaatagtgac
tcatggttagaaagagaggttaatgtcattagcaaaattgggactgacagagtaacaaaa
aagagtatttcatatcaaaaagaccatgatgcatttgaggacgaaaagcagagtaaaata
gtagcagatgctaaaaagctagaaaggatgaacactacacaagaaatagcatctgatgac
actgaagggaatcagggagagaatttcttctatacatcagatgattcatttaagaaaggc
aagaatatgaagcaattgagagatatgctttataaaagtgaacagccaaaaatttcctct
gttgctactaaggagaatgcaaagtttcttgaagataaaagtaaggagaaattacctggt
agtgttgagcagttgctaggggaaagagataggtttgacttgtcagaagataaaaagagt
acatgtaggttttctcatagagaaaagagttcacagaagaagccagattacttatcatct
gttactgagaataatttgttgaaaggagaatgtcttgattctcccactaagagactaaaa
agtattgatttaagaaaaagaagaaatttaaattcaaggagaaatgtcaatgaaagtggt
tcatcatcttctgatactgaagagagtaaagaaaataataaaaagcagaagaaacaaaga
acatcaagccagaagaagacaggcaatgccaaggagaaaaaacgaaactccttaataaca
gttactaaaaaaatgccaggagatatcacattttcatttttggataatgcagaagatgcc
cactcttctgtaagtgaggggagaagtgatgaacagaagataaagcctttaactgacaag
gtaatgaagccttctcataatagattttgtcagtctttaagagatggtgtgttgtctaga
tcagtgcctgtgatagacgttaaggatgacactgacagtgatctcgagaatagaattgct
aagctgatgcttttagaagaaattaaagccagtgtattctctgatgaggatagttcttca
gatgatgaatcataacaagaaaaaaatggatgaactagacaacaagaggaagaaaacctg
ggagacgaggctgtcccaaatcaagtcaattctaaatcagatttgtgttttgaacagttt
acaaagccaggacacagacaaaganncttgaactataaactgaccatgaaaaatggaaaa
tggaaaagaaaaagcacaatgtataaagagcatngagaggccaatggcagaaatgaaagg
aagatgagcattgaggatttagagtatactaattttcaagaatcagtcattgttgaagaa
gtcagtgaatctgaggatggacagcaacctacaacaaagtccacacagaaagtagagtta
gaaaaaggtcagtgggattatccaacagaaaggngtcaaaagcactcccacagtgaaaat
gagagaccttctaaagaaaaactggtaaaggaggctgaaagagtataggtaaaagatgaa
tctaagtcacccaaaaacggcagaatggaaatttggaaggttttaaaagttgataaacta
agagaaaaa
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