Arvicanthis niloticus (African grass rat): 117707421
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Entry
117707421 CDS
T08817
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03022
Basal transcription factors
anu05017
Spinocerebellar ataxia
anu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117707421
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
117707421
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
117707421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117707421
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
117707421
Prokaryotic type
Archaeal type
TFB
117707421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Guanylin
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
117707421
NCBI-ProteinID:
XP_034356719
LinkDB
All DBs
Position
4:complement(96110247..96111300)
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AA seq
343 aa
AA seq
DB search
MVSTSCLDALPRVTCPNHPDAILVEDYRAGDMICPECHLVVGDPVINVGSEWRTFSTDKA
TKDPSQVEDSQNPLLSDGDLSTTIGKGTGTAGFEEFGNSKYQNRRTMSSSDRAMMNAFKE
ITTMAADRINLPRNTVDRINNLFKQVYEQKSLKGRANDACLYIACRQKGVPRTFKEICAV
SRISKKEIGHSFKLILKALETSGEDLITTGDFMFRFCSNLCLPKQVQMAATHIAHKAVEL
DLVPGRSPISVAVAAIYMTSQASAEKQTQKEIGDIARVVDVTIQQPHRLIYPWDPDLFPS
DFKFDTPVDKLPLSYKLRQLSVTLLMYMEHGTFYIATQCWLSP
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcaaccagctgtttggatgctctcccaagagtcacttgtcctaatcatccagat
gcaattttagttgaggactacagagctggtgatatgatctgtcctgaatgccacctagta
gtaggggacccagttatcaatgtgggatctgaatggagaactttcagcactgacaaagca
acaaaagacccatctcaagttgaagactctcagaatcctcttctgagtgatggagatttg
tccaccacgattggcaagggtacaggaactgcaggttttgaagagtttggtaattctaag
tatcagaaccggaggacaatgagtagttctgatagagcgatgatgaatgcattcaaggag
atcacaaccatggcagcagataggatcaacctcccacgcaatacagttgatcgaataaat
aatttattcaagcaagtgtatgagcagaagagcctgaagggaagagctaatgatgcttgt
ctgtacatcgcctgtagacagaaaggcgtccccaggacatttaaagaaatatgtgctgtg
tctcgaatctctaagaaagaaattggtcactcttttaaactgattttgaaagctttggaa
accagcggggaggatctgatcacaactggggacttcatgtttaggttctgctccaacctt
tgcctccccaagcaagtgcagatggccgctacacacatagcccacaaggctgtggaactg
gacttggttcctggcagaagcccaatctctgtggcggtggcagctatatacatgacttcc
caggcctcagctgagaagcaaacacagaaagaaattggggatattgctcgagtagttgat
gttacaatccaacaaccccacagactgatctacccttgggatccagatctcttcccttca
gacttcaagtttgacaccccagtggacaaattacccctcagctataagctgaggcaacta
agtgtcacactcttaatgtacatggaacatggaactttctatatagccacacagtgctgg
ctgagcccttaa
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