Arvicanthis niloticus (African grass rat): 117707491
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Entry
117707491 CDS
T08817
Symbol
Ankrd27
Name
(RefSeq) ankyrin repeat domain-containing protein 27 isoform X1
KO
K20175
ankyrin repeat domain-containing protein 27
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117707491 (Ankrd27)
Membrane trafficking [BR:
anu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117707491 (Ankrd27)
Others
Specific organelles associated proteins
Melanosome
117707491 (Ankrd27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
VPS9
ANK_LRRK2
Ank_KRIT1
Ribonuc_red_sm
EcoEI_R_C
Motif
Other DBs
NCBI-GeneID:
117707491
NCBI-ProteinID:
XP_034356774
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All DBs
Position
1:11940162..11989139
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AA seq
1048 aa
AA seq
DB search
MALYDEDLLKNPFYLALQKWRPDLCSKVAQIHGIVLVPCRGSLPGSVQASCQFESYVLVP
TEGHFQTLDGKAVLIEGNRIKLGAGFACFLSVPILFEETFYNEKEESFSILCIAHPLEKR
EASEEPSAPSDPFSLKTIEDVREFLGRHSERFDKNIASFHRTFRECERKSLRHHIDSVNA
LYTKCLQQLLRDSHMKVLAKQEAQMNLMKQAVEMYVHHDIYDLIFKYVGTMEASEDAAFN
KITRSLQDLQQKDIGVKPEFSFNIPRAKRELGQLNKCTSPQQKLLCLRKVVQLMTQSPSQ
RVNLETMCADDLLSVLLYLLVKTEIPNWMANLSYIKNFRFSSSAKDELGYCLTSVEAAIE
YIRQGSLSMKPPDSEGFGDRLFLKQRMNLLSQMTSTPIDCLFKHIASGNQKEVERLLSQD
DQDKDAMQKMCHPLCSCEDCEKLVSGRLNDPSIVTPFSRDDRGQTPLHVAALCGQASLID
FLVSKGAVVNATDYHGSTPLHLACQKGFQSVTLLLLHYKASTEVQDNNGNTPLHLACTYG
QEDCVKALVYYDVQACRLDIGNEKGDTALHIAARWGYEGILETLLQNGAPTAIQNRLKET
PLKCALNSKILSILEAHPLSSDRRPRPSEVPAQSPTRSVDSISQGSSTSSFSSILVSFRQ
EEVKKDYREVEKLLRAVADGDLEMVRYLLEWTEDDLDDVDDTISTVDLEFCHPLCQCPKC
APAQKKLAKIPASGLSVNVTNQDGFSPLHMAALHGRTDLVPLLLKHGAYSGARNTSQAVP
LHLACQQGHFQVAKCLLDSNAKPNKKDLSGNTPLIYACSAGHHEVVALLLQHGASINACN
NKGNTALHEAVMGRHALVVELLLFHGASVDILNKRQYTAVDCAEPDSKIMELLQVVPSCV
ASGNSVEETDHEGYVTVEIRRKWNPKMYNLPEEPFRRQFCLINPGGRFQEKTSRETMGRD
RSVPDLTGGSLQPEKQRVTGKQSDLSDQSRHQTSEEGNRGLPERPVPRQAVPGHRPMVRR
HTVNDAAILQVPEVTGHLTTHEASVSQS
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggctctatatgatgaagatctcctgaaaaaccctttctacctggcccttcagaagtgg
cgccccgacttgtgcagcaaggtggcccagatccatggcattgtcctagtgccttgcaga
ggaagcctgccgggcagtgtgcaagcctcctgccagttcgagtcctatgttttggtaccc
acggaaggacactttcagaccttagatggaaaggctgtcctcatcgaaggaaacaggatt
aagctaggagcaggttttgcttgctttctctctgtgcccatcctctttgaagagactttc
tacaacgagaaagaagagagtttcagcattctctgtattgctcatcctttggagaagaga
gaagcttcagaagaaccttcagcaccctcagatcctttttccctaaaaaccatcgaagat
gtgagagaatttttgggaagacactcagagagatttgacaagaacatcgcgtctttccac
cggacgttccgagaatgtgaaaggaagagcctccgtcatcacatagactccgtaaacgct
ctctataccaaatgcctccagcagcttctcagagactctcacatgaaggttcttgcaaag
caggaggcccagatgaacctgatgaagcaggcagtagagatgtatgtccatcacgatatt
tacgacctgatctttaaatacgtggggaccatggaggcgagtgaggacgccgcctttaac
aaaatcacaagaagccttcaagatctccagcagaaagacattggagtgaaacccgagttc
agcttcaacatccctcgggcaaagagagagctggggcagctgaacaagtgtacatcccca
cagcagaagctgctgtgcctgcggaaggtggtccagctcatgacacagtctcccagccag
agagtgaatttggagaccatgtgtgctgatgatcttctttctgtcctgttgtatctgctt
gtgaaaacagagatccctaactggatggcaaatttgagttacatcaaaaacttcagattc
agcagttcggccaaagatgagctaggatactgcctgacctcagtcgaggctgcgattgaa
tacatccggcaaggaagtctctccatgaagccgcctgactctgagggatttggcgacaga
ctgtttctcaagcagaggatgaacttattgtcccagatgacatcaacacccatcgactgc
ctgtttaagcacatcgcctctggtaaccaaaaggaagtagaaagacttctgagccaagat
gaccaggacaaagatgccatgcaaaagatgtgccacccgctttgctcctgtgaggactgt
gagaagctcgtctctgggaggctgaatgacccgtcaattgtcactcctttctccagagat
gacagaggtcaaacaccactccatgtggctgccctctgtggtcaggcatccctcattgac
ttcctggtctccaaaggtgccgtagtgaacgccacagactatcatgggtccactccctta
catctggcgtgtcagaagggcttccagagtgtgacgctgctgctgctgcactacaaggcc
agcactgaggtgcaggacaacaacggcaacactccgctccacctggcctgcacctatggg
caggaggattgtgtgaaggccctggtctactatgatgtccaggcatgcagactggatatt
ggtaacgagaaaggagacacagccctgcacattgctgcacgctggggttacgagggcatc
ctagagacgctgctgcagaatggagcccccacagcaatccagaacagactgaaagaaacg
ccactcaagtgtgcattaaactcaaagattctgtctatcctggaagctcatcctctatcc
tctgacaggaggccacggccttctgaggtccctgcacagtctcctacacgctctgtggat
tccatcagccagggctcttctacctccagcttttcttccatattggtgagcttccggcaa
gaagaggtcaaaaaggactacagggaggtagaaaagcttctaagggcagttgctgatggc
gatttagaaatggtgcgataccttctggagtggacagaggatgacctagatgacgtggac
gacaccatcagcacggtggatcttgaattctgtcaccccttatgccagtgccccaagtgt
gctccagctcagaagaaactggcaaagattcctgccagtgggcttagtgtgaatgtgacc
aaccaggatgggttctcacccctgcatatggctgccttgcacggtcggacagacctcgtc
cccctcctactgaagcatggtgcctactcgggtgccagaaacacaagccaagccgtcccg
ctccacctggcctgccagcagggccactttcaggtggcaaaatgtctcttagattccaat
gcaaaacctaataaaaaggacctcagtgggaacacgcccctcatttatgcctgttctgct
ggccatcatgaagtcgtggcactgttgctgcagcatggggcctccatcaatgcttgcaac
aacaaaggcaacacggccctgcacgaggcggtgatgggaaggcatgccttggtggtggag
ctgctcctgtttcacggagcgtctgttgacatcctgaacaagaggcagtacacggcggtg
gactgtgctgagccggattcaaaaataatggagttgctgcaggtagtgccaagttgtgtt
gcatctggaaacagcgtggaggagacagaccacgagggttacgtgactgttgagatcagg
agaaaatggaaccccaaaatgtacaacctgccagaagaaccttttaggagacagttttgc
ctcattaacccagggggccggttccaggagaagacgtcaagggagactatgggaagggat
agaagtgtgccagatcttaccggaggttccctccagccagagaagcaaagagtcacaggg
aagcagagtgacttgtcagaccagagcaggcatcagacctctgaggaaggaaacagagga
ctcccagagaggcctgtgccaagacaggctgttccaggacaccggccgatggtccgccga
cacacagtcaatgatgcagccatactccaggtcccagaggtgactggccacctgaccacc
cacgaggctagtgtttctcagtcttag
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