Arvicanthis niloticus (African grass rat): 117707531
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Entry
117707531 CDS
T08817
Symbol
Prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117707531 (Prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anu03041
]
117707531 (Prpf3)
Spliceosome [BR:
anu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117707531 (Prpf3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
117707531
NCBI-ProteinID:
XP_034356814
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Position
4:complement(75288107..75312934)
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AA seq
683 aa
AA seq
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MSLSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE
EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPAPQPKTPSSSQPER
LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI
APPKVELKDQTKPTPLILDEQGRTVDATGKEVELTHRMPTLKANIRAVKREQFKQQLKEK
PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAR
KTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEENPKREDYFGITNLVEH
PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLTPPPEPKVRISN
LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDISQG
VHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLH
RIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMAREH
FKKHGAEHYWDLALSESVLESTD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgtctaagcgggagctggacgagctgaaaccatggatagagaagacagtgaag
agagtgctgggcttctcagagcccacggtggtcacagcagcgttgaactgtgtggggaag
ggcatggacaaaaagaaggcggctgatcacctgaaaccttttcttgatgattccactctc
cgatttgtggataagctgtttgaagctgtggaggaaggccgaagctcaagacattccaag
tctagcagtgacagaagtagaaaacgagagttaaaggaggtgtttggtgatgactctgag
atctcaaaggaatcatcaggggtaaaaaagcggcgaataccccgttttgaggaggtagaa
gaagagccagaggtgatccctggacctccgtcagaaagccctggcatgctaacgaagctc
cagatcaaacagatgatggaggcagcaacacgacaaatcgaggaaaggaagaaacagctg
agcttcatcagcccccctgcacctcagccaaagacaccttcttcttcccaaccagagcga
cttccaatcggcaacaccattcagccctcccaggctgctacctttatgaatgatgccatt
gagaaagcaaggaaagctgctgagctgcaagcccgaatccaggcccagctggcattgaag
ccagggcttattggcaatgccaacatggtgggcctagctaatctccatgccatgggcata
gctccaccgaaagtagagttaaaagatcagactaagcctaccccactgatcctggatgag
caaggccgcactgtagatgcaacaggcaaggaggtggagctcacacatcgcatgcccacc
ctgaaggcaaacattcgggctgtgaagagggaacagtttaagcagcaactaaaagaaaag
ccatcagaagacatggaatctaatacgttttttgacccccgagtctcaattgccccttcc
cagcgccaaagacgcacttttaaattccatgacaagggcaaatttgagaagattgctcag
cgattacggacaaaggctcagttggagaagctgcaagcagagatttcacaggctgctagg
aaaacaggcattcatacttcaactagacttgccctcattgctcctaaaaaggagctaaag
gaaggcgacattcccgagattgagtggtgggactcttacatcatccccaatggctttgac
cttacagaggaaaatcccaagagagaagattattttggaatcacaaatcttgttgaacat
ccagcccagcttaatcctccagttgacaatgatacaccagttacccttggggtatatctt
acaaagaaggagcagaagaaacttcggaggcaaacaaggagggaagcacagaaagagcta
caggaaaaagtcaggctaggcctgacacctcctccagagcccaaagtgagaatctcaaat
ttaatgcgagtattaggaacagaagcagttcaagaccctacaaaggtagaagcccacgtc
agagctcagatggcaaagagacagaaagcgcatgaagaagccaacgctgcccgaaaactt
acagcagaacagagaaaggtcaagaaaattaaaaagcttaaagaagacatttcacaaggg
gtgcacatatctgtatatagagttcgaaatttgagcaatccagccaagaagttcaagatt
gaggccaatgctgggcagctgtacctgacaggggtggtggtgctacacaaggatgtcaac
gtggtggtggtggaagggggccccaaagcccagaagaaatttaagcgtctcatgctacat
cggataaagtgggatgagcagacatctaacacgaagggagatgatgatgaggaatctgat
gaagaagctgtgaagaaaactaacaaatgtgtgctagtgtgggagggtacggccaaagac
cggagctttggagagatgaagtttaaacagtgccctacagagaacatggctcgagagcat
ttcaaaaagcatggcgctgagcactactgggaccttgcactgagtgaatctgtgctggag
tctactgactga
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