Arvicanthis niloticus (African grass rat): 117707603
Help
Entry
117707603 CDS
T08817
Symbol
Tchh
Name
(RefSeq) trichohyalin
KO
K18626
trichohyalin
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117707603 (Tchh)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
117707603 (Tchh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S_100
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
117707603
NCBI-ProteinID:
XP_034356913
LinkDB
All DBs
Position
4:71748799..71754381
Genome browser
AA seq
1526 aa
AA seq
DB search
MSALIRSIVDITEVFDRYASQSCDGASLSKKDLKNLLEIELGDVLQTPHDSETVDLTLEL
LDRDGNGSVDFNEFLLILFKLAQACYYARDQAAELGEKRALPREKRNLSQDRRQEHQRPR
DRQLEEEPGRRSRQKRLEQEERAEEQRLEQRDKQHRDEEQRLQRRELQELEERLAEKEPL
SWSKGRDTEEFSEVEEQQRREREELKGKGQTEERRLQRRRQEELREPLLRREQELRREQE
LRQELNRRQELRREQELRREQELREELRQGQELNRRQELRREQELRREQELREELRQELR
QELRREQELNRRQEPRREQELRREQELREELRREQELRREQELRQELRREQELRQELRRE
QELSREQELRQELRREQELAEDNEQTRVREPDENITQRLQWQLESEAEARQNKVYSRPRR
QEQRLRQELEERQLREQEEQRRDLQRQRPAEEARERTQRERRQRAEERQEQEQRFRDQEE
QRFREEELQRAELQDSLLEEEQRRRQEERREPNRSRQLREEESQRRHTLYAKPSQRQRRE
EELREERLLQEEQRQQRERKHRREEDLQQEEERLQQEEEQLQREKRRLQRERQYQEEDLQ
QEEERLQQEEERLQRERRRLQQERQYQEEDLQLQDEDQRRDLKWQWQPRKEVEVRSNRLF
AKRREDEETIQQLEDSQERERRQDRRPLQSEEEETRELEQERRRRLQRDRQILEEEQRQR
EHQREAKRLDEAFQEEEQLRGESRRRQQERDGKFLEEERQLRKEREEQRRRQEQEREFQE
EERRLQEHEKELLQERDRKSFEEQERRQQREEEEVRRQEQDRRFRREQEPRQEREEEQLR
DRTFRRREQEPRQERDRSFRREQELRQELEEEQRRRQERDRNSREEQELRQEREEEQLRD
RKIRREQELRRDRQLREEEERRQEREEEQLRGQERDRLRVEEEQRRRQERDRKLRREQEL
RQELEEEQRRRQERDRKLRREQEREQELRQELEEEQRRRQERDRNSREEQELRQELEEEQ
LRDRKIRREQELRRDRQFREEEERRQEREERQLSRQEPDRRIRREQELRQEREEEERRQQ
RDRKFRREEELRQELEDERLRRQEPDRRFLREQELRQEREEEQLRDRKIRREQELRQDRK
FREEEERRQELEEEKLRRQERDRRFRREQELRQELEEEQLRDRKIRQELQEEELRRQERD
RKFREEQELRQELEEEQLRDRKFRREQELRREQELRREREEERLRDRKIRQDQELRQELE
EEELRDRKFRREQELRREREEEQQHRQEREEEQFRFEDQQRRRQEREQQLRQERDRRVRE
EEELLQEREELLRRELGGRKFREEERLRQEREEQQRRLQERDNRRFREEVELRHDREEQQ
LRFQEREQQLRRERQERDRKFREVEELRQEEEQRRRQELDRKFREEKHLREEQQLRREKR
DEQYPAEEQFARDKIRRQEQELRQEEEERRRQERERKLQEEQIRRRQEEQRRRQILEPGT
RQFANVPVRSSPLYEYIQEQRSQYRP
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcacttataagaagcattgttgatatcaccgaagttttcgatcgatatgcatca
caaagttgtgatggagcatcacttagcaagaaagacctgaaaaacctccttgagatagaa
cttggagatgtccttcagacaccacatgactctgagacggtagacctgaccctagaactt
ctggatcgcgacggcaacgggagtgttgatttcaacgaattcctcctgatccttttcaag
cttgctcaagcttgctattatgctcgcgatcaggccgcagagctaggcgagaagagagcc
ctgcctagggaaaagaggaacctgtcacaagatcgcaggcaagaacaccaaaggccccgg
gacagacaactggaagaagaacctgggcgccgaagccggcagaagagacttgagcaggag
gagcgcgctgaggagcagaggttagagcagcgcgacaagcaacatcgcgatgaagagcag
cgactgcaaaggcgagaactgcaagaactagaggagcgccttgcagagaaagagccgcta
agctggagtaagggtcgtgacactgaggagttttctgaggtagaggaacagcaaaggcga
gagagagaggaactcaagggcaagggccaaacagaagagagaaggctgcagaggcgccgg
caagaagagctacgcgaacccctgctgaggcgcgagcaggagctaaggcgtgagcaggag
ctgagacaggagctgaatcgcaggcaggagctgaggcgcgaacaagagctaaggcgcgag
caggagctgagggaggaactgaggcaggggcaggagctgaatcgcaggcaggagctgagg
cgcgaacaagagctaaggcgcgagcaggagctgagggaggaactgaggcaggagctgagg
caggaactgagacgtgagcaggagctgaatcgcaggcaggagccgaggcgcgaacaagag
ctaaggcgcgagcaggagctgagggaggaactgaggcgcgagcaggagctaaggcgcgag
caagagctgaggcaggagctgaggcgcgagcaagagctgaggcaggagctgaggcgcgag
caagagctgagccgtgagcaagagctgaggcaggagctgaggcgcgagcaggagctggct
gaggacaacgagcagacgcgggtccgggaacccgacgagaacatcactcagaggttgcag
tggcagctcgaaagcgaggcagaagcccgtcagaacaaggtctactctaggcctcgcagg
caggagcagagacttcgccaggagctggaggagcgtcagctccgggagcaggaggagcag
cgccgcgacctccaacggcagcgtcccgccgaggaggcgcgcgagcgcacccagagggag
aggcggcagcgggcggaggagcgccaggagcaggagcagcggttccgcgaccaggaggag
cagcgcttccgggaggaggagctgcaaagagctgagctccaggacagcctcctagaggaa
gaacagaggcggcgccaggaggaacgtcgggagccaaacaggagcaggcaactgcgcgaa
gaagaaagccagaggcgccacacactgtacgccaaacccagccagaggcaacgtagggag
gaagaactacgcgaggagcggctgttgcaagaagagcagcgccagcaacgagagaggaaa
caccgcagagaggaggatctgcagcaggaggaagagcggctgcagcaagaggaagagcaa
ctgcagcgggaaaagaggcgcctgcagcgggagaggcagtatcaggaggaggacctgcag
caggaggaagagcggctgcagcaggaggaagagcggctgcagagagaaaggaggcgtctg
cagcaggagaggcaatatcaagaggaggacctgcagctgcaggatgaagatcagcgtagg
gatctgaaatggcagtggcaaccaaggaaagaagttgaagttcgtagtaacaggctcttc
gccaaacgcagagaggatgaggaaacgatccagcagctggaagattctcaggagcgagag
agacgtcaggatcggcggcctctgcaaagcgaagaggaagagacgagagagctggagcag
gagaggaggcgccgactgcagcgcgatcgtcagatcctagaggaagagcagcgtcagcga
gagcaccaacgggaagccaaaagactagatgaggcgttccaggaggaagaacagctccgg
ggagaatcgagaagacggcaacaggagagagatggcaagttccttgaggaggaaaggcag
ctgcggaaggaacgcgaagaacagaggcggcgtcaagaacaagagagagaattccaagag
gaggaacggcgcctccaagaacatgagaaagaacttctgcaggagcgcgacagaaaatcc
tttgaggaacaagagcgccgccagcagcgtgaggaagaggaggtaaggcgccaggaacaa
gacagaagattccgccgcgaacaagaaccccgccaggagcgtgaggaagagcagctgagg
gacagaacattccgccgccgggaacaagaaccccgccaggagcgcgacagaagtttccgc
cgggaacaagagctccgccaggaactggaggaagagcagaggaggcgccaggaacgtgac
agaaactcccgtgaggaacaagagctccgccaggaacgcgaggaagagcagctgagggac
cgaaagatccgccgggagcaagagctcagacgcgacagacaactccgtgaggaagaagag
cgccgccaggaacgcgaggaagagcagctgcgtggccaagagcgagaccgtttgagggtg
gaggaagagcagcggcgccgccaggaacgtgacagaaaattacgccgggaacaagagctc
cgccaggaactcgaggaagagcagcggcgccgccaggaacgtgacagaaaattacgccgg
gaacaggagcgggaacaagagctccgccaggaactggaggaagagcagaggaggcgccag
gaacgtgacagaaactcccgtgaggaacaagagctccgccaggaactcgaggaagagcag
ctgagggaccgaaagatccgccgggagcaagagctcagacgcgacagacaattccgtgag
gaagaagagcgccgccaggaacgcgaggaaaggcagctgagccgccaggaacccgacaga
agaatccgccgggaacaggagctccgccaggagcgcgaggaagaggagcgccgccagcag
cgtgacagaaagttccgccgggaagaggagctccgccaggaactggaggacgagcggcta
aggcgccaggaaccggacagaagattcctccgagaacaagagctccgccaggaacgcgag
gaagagcagctgagggacagaaagatccgcagggagcaagagcttagacaggacagaaaa
ttccgtgaggaagaagagcgccgccaggaactggaagaagagaagctaaggcgccaggaa
cgtgacagaagattccgccgggaacaagagctccgtcaggaactggaggaagagcagctg
agggacagaaagatccgccaggaactccaggaagaggagctaaggcgccaggaacgtgac
agaaaattccgtgaggaacaagagctccgccaagaactggaagaagagcagctgagggac
agaaagttccgccgggagcaagagctccgccgggaacaagagctccgccgggagcgcgag
gaagagcggctgcgggacagaaagatccgccaggaccaagaactccgtcaggaactggag
gaagaggagctgcgggacagaaagttccgccgggagcaagagctccgccgggagcgcgag
gaagagcagcagcaccgccaggagcgcgaggaggaacaatttcgctttgaggaccagcag
cgccgccgccaggaacgcgagcaacagttaagacaggagcgcgacaggagagtccgtgag
gaagaagagcttcttcaggaaagggaggagctgctgcgtcgcgagttgggtggcaggaag
ttccgggaagaggagcgactccgccaggaaagagaggaacagcagcgtcgtctccaggaa
agggacaacagaagattccgcgaggaagtagagctcaggcacgacagggaagagcagcag
ctgcgtttccaggaacgggagcaacagcttcgccgagagcgccaagagcgagacagaaaa
ttccgtgaggtagaagagcttcgccaagaagaagagcagcgccgccgccaggagcttgac
aggaaattccgggaagagaaacacctgcgcgaggaacagcagcttcggagagagaagcga
gatgagcagtacccagctgaggagcagtttgccagggataaaattcgtcgccaggagcaa
gaactacgtcaagaagaggaagaaagacgtcgccaagagcgggagagaaaattacaagaa
gagcagatccgtcgtaggcaagaggagcagaggcgccgccaaatcctggagcctggcaca
cgccagtttgccaatgtcccagtgcgttccagccctctctatgagtacatccaagagcag
aggtctcagtaccgcccttaa
DBGET
integrated database retrieval system
