Arvicanthis niloticus (African grass rat): 117707620
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Entry
117707620 CDS
T08817
Symbol
Pitx2
Name
(RefSeq) pituitary homeobox 2 isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117707620 (Pitx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117707620 (Pitx2)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117707620 (Pitx2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
XRCC4_C
Motif
Other DBs
NCBI-GeneID:
117707620
NCBI-ProteinID:
XP_034356928
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All DBs
Position
4:106407332..106431854
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AA seq
324 aa
AA seq
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MNCMKGPLPLEHRAAGTKLSAASSPFCHHPQALAMASVLAPGQPRSLDSSKHRLEVHTIS
DTSSPEVAEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMS
TREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPG
YSYNNWAAKGLTSASLSTKSFPFFNSMNVNPLSSQSMFSPPNSISSMSMSSSMVPSAVTG
VPGSSLNSLNNLNNLSSPSLNSAVPTPACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSS
FGYASVQNPASNLSACQYAVDRPV
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaactgcatgaaaggcccgctgcccttggagcaccgagcagccgggactaagctgtcg
gccgcctcctcacccttctgtcaccatccccaggcgttagccatggcttcggtcctagct
cctggtcagccccgctccctggactcctccaaacatagactggaggtgcatacaatctct
gatacttccagccctgaagtcgcagagaaagataagagccagcaggggaagaatgaagat
gtgggcgccgaggacccgtccaagaagaagcggcaacgccggcagagaactcatttcact
agccagcagcttcaagagctggaagccactttccagagaaaccgctacccagacatgtcc
actcgcgaagaaatcgccgtgtggaccaaccttacagaagcccgagtccgggtttggttc
aagaatcgccgggccaaatggagaaagcgggaacgcaaccagcaggccgagctgtgcaag
aatggcttcgggccgcagttcaatgggctcatgcagccttatgatgacatgtaccccggc
tactcgtacaacaattgggctgcaaagggcctcacgtcagcgtctctgtccaccaagagc
ttccctttcttcaactctatgaacgtcaatcccctgtcctcccagagcatgttttccccg
cccaactccatctcatccatgagtatgtcgtctagcatggtgccctccgcggtgaccggc
gtcccgggctccagcctcaatagcctgaataacttgaacaacctgagcagcccgtcgctg
aattccgcggtgcccacgcccgcctgtccttacgcgccgccgactcctccgtacgtttat
agggacacatgtaactcgagcctggccagtctgagactgaaagcaaagcagcactccagc
ttcggctacgccagcgtgcagaacccggcctccaacctgagtgcttgccagtatgcagtc
gaccggccggtgtga
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