Arvicanthis niloticus (African grass rat): 117707704
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Entry
117707704 CDS
T08817
Symbol
Rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
KO
K12876
RNA-binding protein 8A
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03013
Nucleocytoplasmic transport
anu03015
mRNA surveillance pathway
anu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117707704 (Rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
117707704 (Rbm8a)
03015 mRNA surveillance pathway
117707704 (Rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117707704 (Rbm8a)
03041 Spliceosome [BR:
anu03041
]
117707704 (Rbm8a)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117707704 (Rbm8a)
Spliceosome [BR:
anu03041
]
Complex C
Other components
EJC/TREX
117707704 (Rbm8a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
117707704
NCBI-ProteinID:
XP_034357083
LinkDB
All DBs
Position
4:76096618..76099613
Genome browser
AA seq
174 aa
AA seq
DB search
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARMREDYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVE
YETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgtgctggatcttcacgaggcggggggcgaggatttcgccatggatgaggat
ggggacgaaagcatccacaagttaaaagaaaaagcgaagaaacggaagggccgcggtttt
ggctccgaagaggggtcccgagcgcggatgcgggaggattatgacagtgtggagcaggat
ggtgatgaacctggaccacagcgctctgttgaaggttggattctctttgtcactggagtc
cacgaagaagccactgaagaagatatccatgacaaattcgctgaatatggggaaataaaa
aacatccaccttaatttggacaggcgcacaggatatttgaaggggtatactctggttgaa
tatgaaacatacaaagaggctcaggctgccatggagggactaaacggtcaagatttgatg
ggacagccaatcagtgttgactggtgttttgttcgtggtccaccaaagggcaagaggaga
ggaggccgaagacgaagcaggagtccagaccggagacgccgttga
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