Arvicanthis niloticus (African grass rat): 117707715
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Entry
117707715 CDS
T08817
Symbol
Bcan
Name
(RefSeq) brevican core protein isoform X1
KO
K06795
brevican
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
anu00535
]
117707715 (Bcan)
00536 Glycosaminoglycan binding proteins [BR:
anu00536
]
117707715 (Bcan)
04091 Lectins [BR:
anu04091
]
117707715 (Bcan)
Proteoglycans [BR:
anu00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
117707715 (Bcan)
Glycosaminoglycan binding proteins [BR:
anu00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
117707715 (Bcan)
Lectins [BR:
anu04091
]
C-Type lectins
Lecticans
117707715 (Bcan)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
EGF
Sushi
hEGF
EGF_2
EGF_3
I-set
Ig_2
ig
Izumo-Ig
Ig_3
EGF_CA
Motif
Other DBs
NCBI-GeneID:
117707715
NCBI-ProteinID:
XP_034357106
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All DBs
Position
4:complement(67476048..67488983)
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AA seq
890 aa
AA seq
DB search
MIPLLLSLLAALVLTQAPAALADDLKEDSSEDRAFRVRIGATQLRGVLGGALAIPCHVHH
LRPPPSRRPAPGFPRVKWTFLSGEREVEVLVARGLRVKVNEAYRFRVALPAYPASLTDVS
LVLSELRSNDSGVYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSARYAFSFAGAQEACAR
IGARIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQNPREACYGDMDGYPGVRNYGVVG
PDDLYDVYCYAEDLNGELFLGAPPSKLTWEEARDYCLERGAQIASTGQLYAAWNGGLDRC
SPGWLADGSVRYPIITPSQRCGGGLPGVKTLFLFPNQTGFPSKQNRFNVYCFRDSAHPSA
FSEASIPASDGLEAIVTVTEKLEELQLPQETMESESRGAIYSIPITEDGGGGSSTPEDAA
EAPKTPLDSETQSIAPPTGSSEEEGVALEEEGRSKDTETLEEEKNQEDLWVWPRELSSPL
PTGLETEHSLSQVSPPAQAVLQLGASPSPRPPRVHGPPAETLLPTREGSLTSTPDGAREV
GGETGSPELSGVPRESEEAGSSSLEDGPSLLPATWAPVGTRELETPSEEKSGRTVLTGTS
VQAQPVLPTDSASRGGVAVAPSSGDCIPSPCHNGGTCLEEKEGFRCLCLPGYGGDLCDVG
LHFCSPGWEAFQGACYKHFSTRRSWEEAESQCRALGAHLTSICTPEEQDFVNDRYREYQW
IGLNDRTIEGDFLWSDGAPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHL
SYTCKMGLVSCGPPPQLPLAQIFGRPRLRYAVDTVLRYRCREGLAQRNLPLIRCQENGLW
EPPQISCVPRRPVSDRRKQGRALRSMDTPEGPRGQLSRHRKALLTPPSSL
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgatcccactgcttctgtccctgctggcagctctggtcctgacccaggcccctgcagcc
ctcgctgatgacctgaaagaagacagctcagaggatcgcgccttccgcgtgcgcatcggt
gccacgcagctgcggggcgtgctgggcggtgccctggccatcccatgccacgtccaccac
ctgcggccgccacccagtcgccggcccgcgccgggctttcccagagtcaagtggaccttc
ctgtccggggaacgagaggtggaggtgctggtggctcgcgggctgcgcgtcaaggtaaac
gaagcctaccggttccgcgtggcgctgcctgcctaccccgcatcgctcacggatgtgtct
ctagtattgagcgaactgcggtccaatgattccggggtctatcgctgcgaggtccagcac
ggtatcgacgacagcagtgatgctgtggaggtcaaggtcaaaggggtcgtcttcctctac
agagagggctctgcgcgctatgctttctcctttgcgggagcccaggaagcctgcgctcgc
attggagcccgaatcgccacccctgagcagctctatgctgcctacctcggcggctatgag
cagtgtgatgcaggctggctgtcggaccaaactgtgaggtaccccatccagaacccacga
gaggcctgctatggagacatggacggctaccctggagtgcggaactacggagtggtgggt
cctgatgacctctacgacgtctactgttacgctgaagacctaaatggagaactgttccta
ggagcccctcccagcaagctgacgtgggaggaggctcgggactactgtctggaacgtggt
gcacagatcgctagcacaggccagctgtatgcagcctggaatggtggcctggacagatgt
agccctggctggctggctgatggcagcgtgcgctaccccatcatcacgcccagccaacgc
tgtgggggtggcctgccaggagtcaagaccctcttcctcttccccaaccagactggcttc
cccagcaagcagaaccgcttcaatgtctactgcttccgagactctgcccatccctctgcc
ttctctgaggcctccatcccagcctctgatggactagaggccattgtcacagtgacagag
aagctggaggaactgcagttgcctcaggaaactatggagagcgagtctcgtggggcgatc
tactccatccccatcacagaagatggcggaggaggaagctctaccccagaagatgcagca
gaggcacccaagactcctctagactcggaaacccaatccattgcaccacctaccgggtcc
tcagaagaggaaggagtagccctggaggaagaaggaagatccaaagacacagagactctg
gaggaagagaagaatcaggaggacctgtgggtgtggcccagagagctcagcagccctctc
cctactggcttggaaacagagcattcactctcccaggtgtccccaccagcccaggcagtt
ctacagctgggtgcatcaccttctcccaggcctccaagggtccatggaccacctgcagag
actttgctccccacaagggagggaagcctcacatccactccagatggggcaagagaagta
gggggggaaactgggagccctgagctctctggggttcctcgagagagtgaggaggcaggg
agttccagcttggaggatggcccttccctacttccagctacatgggcccctgtgggtacc
agggagctggagaccccctcagaagagaagtctggaagaactgttctgacaggcacctca
gtgcaggcccagccagtgctgcccaccgacagtgccagccgcggtggagtggcggtggct
ccctcatcaggtgactgtatccccagcccctgccacaatggtgggacatgcttggaggag
aaggagggtttccgctgcctatgtttgccaggctatgggggggacctgtgcgatgttggc
cttcacttctgcagccctggctgggaggccttccagggtgcctgctacaagcacttttcc
acacgaaggagttgggaggaggcagaaagccagtgcagagcactaggtgctcatctgacc
agcatctgcacccctgaggagcaagactttgtcaatgatcgataccgggaataccagtgg
attgggctcaatgacaggaccatcgagggtgacttcttgtggtcagatggtgcccctctg
ctctatgaaaactggaaccctgggcagcctgacagctacttcctgtctggggagaactgt
gtggtcatggtgtggcatgaccagggacagtggagtgatgtgccctgcaactaccaccta
tcctacacctgcaagatgggtcttgtgtcctgtggacctccaccacagctgcccctagct
caaatatttggtcgccctcggctgcgctacgcggtagatactgtgcttcgatatcggtgc
cgagaggggctggcccagcgcaacctgccattgatccgctgccaggagaatgggctttgg
gagcccccccagatttcctgtgtgcctcgaagacctgtaagtgacaggaggaaacagggc
cgtgctctgcgctcaatggacaccccagaaggaccacggggacagctctcaaggcacagg
aaggcactgttgacgcctccctccagtctctag
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