Arvicanthis niloticus (African grass rat): 117707809
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Entry
117707809 CDS
T08817
Symbol
Syde2
Name
(RefSeq) rho GTPase-activating protein SYDE2 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117707809 (Syde2)
Membrane trafficking [BR:
anu04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
117707809 (Syde2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
C2
Motif
Other DBs
NCBI-GeneID:
117707809
NCBI-ProteinID:
XP_034357233
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Position
4:122041287..122074293
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AA seq
1329 aa
AA seq
DB search
MAEPLRRTLGRLGERRGPGALGLHADAVAASLSEGRSPSRELAGPGMEPPAWATRAPSEQ
PGARVPWSRGAPEAAAPGRAFARASPGTEGSSDDGEDEGADYYENLPAGCAPDGAEALRA
SPSQAAGSSPGMEGGRLETGRLQTQLREAYYLLIQAMHDLPPDSGTRRGGPAGTRALGQQ
PPLPRGAAVRPACSPRGGDRPPLQVSPPRSPPPESRVGRPPSPRMQLSSCRSLESLRVSP
QPPLLQRWASDSWIRCSAHRDRDEPQPRGGGMDGWNRGSHRAATSAALLPPICHDPSRSS
GRPFKDPAGTSVISSSQEDHPEELPLLKPPAVTVKKLQKWMYKGRLLSLGMKGRARGTAP
KVPGAQATSPNLGSWKVHENHVLSVTTDQRITLTDLFENVYGSPLKKREPEDIRGNTELR
GHLNNITVSKKRNWLYQSTLRSQSLEENKQSQDRHYFSRSPVSPPRHQPVCTSHRGYCTH
VVCNAASSPLSRNGSSAFSEDNDADDEGEIWYNPIPEDDSLGIAHVLNLEETNATTLKLP
AVSVSMLPARDLMKVEPHSEDLLCPTQHRGDVQTSQSNGINSVDSIHSTEIIQQCKQRLG
YRTQGSPTAEDGPVLKSAFTGPGILVSTNRTELRAMEPCSPSPSPVKKGSSITWSLPDKI
KSPRTVRKLSMKMKRLPEFSRKLGARGALHYMNSPESTPPLSKWNCGEIPQGVILTSGNP
TRNVISRYHLDTTVSSQHSYQKKPLGSSKYSCKGGYLSDGDSPELRTRSNKHGSEHKVGK
GRETIPSSCSKNDVDIGAFRHYSFADQPRCSQYISGLMSVHFYGAEGLKPPRIDSKDVFC
AIQVDSVNKARTALLTCRTTFLDMDHTFNIEVENAQHLKLVVFSWEPTPRRNRVCCHGTV
VLPALFRVTKTHQLAVKLEPRGLIYVKVTLMEQWENSLHGLDKNRESVMFGVDIQKVVEK
ENVGLMVPLLIQKCIMEIEKRGCQVVGLYRLCGSAAVKKELREAFEKDSKTVGLCESQYP
DINVITGVLKDYLRELPSPLITKQLYEAVLDAMVKSPLKMSPNGCENESSDSRFAVGLLD
CLPDVEKATLKMLLDHLKLVASYHEVNKMTCQNLAVCFGPVLLNQRQETSAHSNRVFTDS
EELASALDFKKHIEVLHYLLRLWPVQRITVKEPRDSLCQEQSSSLNYLRRKKERPCVLNL
SGTNSSGVLRPRQARLDSPLSNRYAGDWSSCGESYSVNPKENFKDLDYDDVPLEDGESRD
YSKMDGAEVMTTQQIPMSGGCTFQTYLTVQTIESTVDQKANLRDLQESIDTLIGNLEREL
SKNKLNMSV
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcccctgcgcaggacgctcggccggctcggggagcggcgcggtcctggggcg
ctcgggctgcacgcggacgccgtagcggcctcgctctccgagggacgctcgccgtcccgc
gagctcgcgggccccggcatggagccgcccgcgtgggcgacccgggcgccctccgagcag
ccaggcgcgcgggtcccatggtctcgcggggctccggaggccgccgctccgggccgcgcg
tttgctcgcgcttccccaggcaccgaaggcagcagcgacgacggggaggacgagggcgcc
gactactacgaaaacctgcccgcgggctgcgcgcccgatggggcggaggcgctgcgggcc
tcgccttcccaagcggcgggctcctccccggggatggagggcggccgcctggagaccggc
aggctgcagacccagttgcgagaggcctattatctgctgatccaggccatgcacgacctg
ccccctgactcgggcacgcggcggggcggacccgcgggaacccgggctctgggccagcag
ccgcctctcccccgcggcgcagccgtgcgcccagcctgcagcccccgaggcggcgaccgc
cctccgctgcaggtgtccccgccccggtcgcctccgccggagtcgagagtgggacggcct
cccagtcctcggatgcagctgtccagttgcagaagtctcgagagcctccgcgtgagcccg
cagccgcctctgctccagcggtgggcgagcgacagctggatcaggtgcagtgcgcacagg
gacagggacgagccccagccacgtggaggtgggatggacggctggaaccggggcagtcac
cgggctgctacgtccgctgctctcctgcctcccatctgccatgaccccagccggtcctcg
ggacgtccctttaaggatcctgcggggacctctgtgatatccagcagccaagaagaccat
cccgaggagcttcccctcctcaagccacctgcggtgactgtcaagaaactgcagaagtgg
atgtacaaaggacgtctgctgtccctggggatgaagggtcgcgctcgtgggacagcaccc
aaagttcccggagcgcaggcaacctctccaaatttgggcagttggaaagtgcatgaaaac
cacgtcctctcggtgacaacggaccaaagaatcacactgacagacttatttgagaatgtc
tatgggtctccactgaagaaacgagaacctgaagatataaggggtaacactgagcttaga
ggtcaccttaacaacatcactgtttcaaagaagcgcaattggctgtatcagagcactctg
aggtctcagagtctggaggagaataagcaaagccaggacaggcattatttctcccgctcc
cctgtgtctccgcccaggcatcagcctgtctgtacatcccacaggggatactgcacacac
gttgtgtgtaatgctgccagctctccgttatcaagaaacggctcttcagcctttagcgag
gacaatgacgcggatgatgaaggagaaatatggtataatcccatccccgaggatgacagc
ttgggcatagcacacgtcttgaatcttgaggagacaaacgccactaccctgaagctcccc
gctgtcagtgtgagcatgttgcctgccagagacctgatgaaggtggagcctcatagtgaa
gacttgctgtgtcctacccaacacagaggtgatgtccagacctcacagtcaaatggaatt
aactctgtagattccattcattctacagaaattattcagcaatgcaaacaaaggttagga
tacaggacacaaggaagccccacggcagaggatggccccgtgttgaaatctgcttttaca
ggccccgggatcttagtctctacaaataggactgaactgagagcaatggagccatgttct
ccaagccccagccctgtgaagaaaggcagttcgattacctggtctttaccagataaaata
aagtctccacgcactgtgaggaaactttctatgaaaatgaaaaggttaccagagttcagc
cggaagctgggtgcccggggagccttacactacatgaacagtccagagagtacccctcct
ttgtctaaatggaactgtggagaaattcctcagggtgtcattctgacttccgggaaccca
accaggaacgtgataagccggtaccatctggataccaccgtatcctctcaacacagctac
cagaagaaacccctcgggagctcgaagtattcctgtaagggtgggtacctcagcgacgga
gactcacccgagcttagaactagatctaacaagcacggatctgagcacaaagttgggaaa
gggagagaaaccattccaagcagttgtagcaaaaatgatgtagacattggtgcctttaga
cactatagctttgcggatcaacccagatgctctcagtatatatccggtctcatgagcgtg
cacttctacggagcagagggtttgaaaccaccccggatagattcgaaagatgtcttttgt
gccattcaggtagactcagtaaacaaagccaggacagctctgctcacctgtaggacgacg
ttcttagacatggaccacactttcaacatcgaggttgaaaacgcacagcatctgaagctg
gtggtgttcagctgggagcccactcccaggaggaaccgcgtgtgctgtcacggcacagtc
gtcctgcccgctttattcagagtgacaaaaacacatcagctggccgtcaagctggagcca
agagggcttatttacgtcaaggtgaccctgatggagcagtgggagaattctctccatggc
ctggataagaaccgagaatcagtgatgttcggagtcgacattcaaaaagttgtagaaaaa
gaaaatgtcggcttgatggtgccactgctgatacagaaatgtatcatggagattgaaaag
agaggctgtcaggttgtaggcctgtatcgactgtgtggctcagccgccgtgaagaaagag
cttcgagaggcgtttgagaaggacagcaagactgttggtctgtgtgaaagccagtaccca
gatataaatgtaataacaggtgttcttaaggactatttacgagaacttccttctccccta
ataactaagcagctgtatgaggctgtgttagatgctatggtgaaaagccctttgaaaatg
tcaccgaatggttgtgagaatgagtccagtgactccaggtttgccgttggcctgctggac
tgcctgccagacgtcgagaaggcaaccctaaagatgttgttagatcatctgaagctggtg
gcttcttaccacgaagtgaataagatgacctgccagaatttggctgtgtgctttggacca
gtgttgcttaaccagaggcaagagacttcggcccacagcaacagagtcttcactgattct
gaagaacttgcaagtgctttggattttaaaaaacacatcgaagttcttcattacttactc
cggctctggccagtgcaacgcataactgtcaaagaacccagagacagtttgtgccaggag
cagtcatcttctctgaattacttgaggcggaagaaagagcgaccatgtgtattaaatctg
agtggtacgaattcatctggggtgctgaggccaaggcaggcccgattagacagtccactc
agcaaccgctatgccggagactggagcagctgcggggagagttactctgtaaatccaaaa
gaaaatttcaaggatttggattacgatgacgttcccttagaagatggagaaagtagagac
tatagcaaaatggacggagcagaagtcatgaccacgcaacaaatccccatgtcaggaggg
tgcacgtttcagacgtacttgacagtgcagaccattgagtccacagtggatcagaaagct
aacctcagagatctgcaggaaagcattgatactttgattggcaatctggaacgtgagctc
agcaaaaacaagctgaacatgagtgtttga
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