Arvicanthis niloticus (African grass rat): 117707887
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Entry
117707887 CDS
T08817
Symbol
Gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03022
Basal transcription factors
anu05017
Spinocerebellar ataxia
anu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117707887 (Gtf2b)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
117707887 (Gtf2b)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
117707887 (Gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117707887 (Gtf2b)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
117707887 (Gtf2b)
Prokaryotic type
Archaeal type
TFB
117707887 (Gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
Sigma70_r4
RB_B
KIF9
Motif
Other DBs
NCBI-GeneID:
117707887
NCBI-ProteinID:
XP_034357356
LinkDB
All DBs
Position
4:119047937..119065985
Genome browser
AA seq
316 aa
AA seq
DB search
MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA
TKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE
ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCLPKQVQMAATHIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
PSDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaccagccgtttggatgctctcccaagagtcacttgtccgaatcatccagat
gcaattttagttgaggactacagagctggcgatatgatctgtcctgaatgcggcctagta
gtaggggaccgagttattgatgtgggatctgaatggagaactttcagcaatgacaaagca
acgaaagacccatctcgagttggagactctcagaatcctcttctgagtgatggagatttg
tccaccatgattggcaagggtacaggagctgcaagttttgatgagtttggcaattctaag
tatcagaaccggagaacaatgagtagctctgatagagcgatgatgaatgcattcaaggag
atcacgaccatggcagacaggatcaacctcccacgcaatatagttgatcgaacaaataat
ttattcaagcaagtgtatgagcagaagagcctgaagggaagagctaatgatgcaattgct
tctgcttgtctgtacatcgcctgtagacaggaaggcgtgcccaggacatttaaagaaata
tgtgctgtgtctcgaatctctaagaaagaaattggtcgctgttttaaactgattttgaaa
gctttggaaaccagcgtggacctgatcacaactggggacttcatgtctaggttctgttcc
aacctttgcctccccaagcaagtgcagatggccgctacacacatagcccgcaaggctgtg
gaactggacttggttcctggcaggagcccaatctctgtggcagcggcggctatatacatg
gcttctcaggcctcagctgagaagcgaacacagaaagaaatcggggatattgctggtgta
gctgatgttacaatccgacagtcctacaggctaatctaccctcgggctccagatctcttc
ccttcagacttcaagtttgacaccccagtggacaaattaccccagctataa
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