Arvicanthis niloticus (African grass rat): 117707898
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Entry
117707898 CDS
T08817
Symbol
Chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117707898 (Chd2)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117707898 (Chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
117707898
NCBI-ProteinID:
XP_034357373
LinkDB
All DBs
Position
1:complement(45522986..45633396)
Genome browser
AA seq
1826 aa
AA seq
DB search
MMRNKDKSQEEDSSLHSNASSHSASEEASASDSGSQSESEQGSDPGSGHGSESNSSSESS
ESQSESESESAGSKSQPVLPEAKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPS
RFNIKEEASSGSESGSPKRRGQRQLKKQEKWKQDPSEDEQEQGTSAESEAEQKKVKARRP
VPRRTVPKPQVKKQPKIQRGKRKKQESSDDDDDDDEAPKRQTRRRAAKNVSYKEDDDFET
DSDDLIEMTGEGVDEQQDNSETIEKVLDSRLGKKGATGASTTVYAVEANGDPSGDFDTER
EEGEIQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDV
EYFNCQQELASELNKQYQIVERVIAVKTSKSALGQTDFPAHSRKPAPSNEPEYLCKWMGL
PYSECSWEDEALIGKKFQNCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPSYLGGE
NLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVV
PLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILL
KDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLL
HFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVE
MSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKAPEDSERETGQ
EVLQSLIRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGS
IKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR
AHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLENNSGRSNS
NPFNKEELTAILKFGAEDLFKEIEGEESEPQEMDIDEILRLAETRENEVSTSATDELLSQ
FKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKA
QTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRRGRPRSVRKDLVEGFTDAEIRRFI
KAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENASEGK
GPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYCLTCRVKAAHFDVE
WGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQGKQLQTRVDYLLKL
LRKGLEKKGTVTSGEEAKLKKRKPRVKKENKAPRLKDEHGLELSPRHSDNPSEEGEVKDD
GLEKSPTKKKQKKKENKENKEKPVSSRKDREGDKERKKSKEKKAKVKGGDAKSSSKAKRS
QGPVHITAGSEPVPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGLSVQEQLEH
TRNCLLKIGDRIAECLKAYSDQEHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRSQ
EEEEQKKKDDSLGGKKPFRPETSGSSRDSLISQSHTSHNLHPQKPHLPASHGPQMHGHPR
DNYSHPNKRHFSNADRGDWQRERKFNYGGGNNAPWGGDRHHQYEQHWYKDHHYGDRRHMD
AHRSGSYRPNNMSRKRPYDQYNSDRDHRGHRDYYDRHHHDSKRRRSDDFRPQNYHQQDFR
RMSDHRPTMGYHGQGPSDHYRSFHTDKLGEYKQPMPSLHTTLSDPRSPPSQKSPHDSKSP
LDHRSPLERSLEQKNNPDYNWNVRKT
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaagaggaggacagctcgctgcacagcaatgcatcg
agtcattcagcctctgaagaagcttcagcttcagactctggcagtcagtctgaaagtgag
cagggcagcgatcccggaagtggacatggcagcgagtccaatagcagttcggaatcttct
gagagccaatcagagtctgagagtgaatcggcaggttccaaatctcagccagtccttcca
gaagccaaagagaagcctgcctctaagaaggaacggatagctgatgtgaagaagatgtgg
gaagaatatcctgatgtttatggggttaggaggtcaaatcgaagcagacaagaaccatcc
cgatttaatattaaagaagaggcaagtagcgggtctgagagtgggagtccgaaaagaaga
ggccagaggcagctgaaaaaacaagaaaaatggaaacaggacccctcagaagacgaacag
gaacagggaaccagtgcagagagtgaggcagaacaaaagaaagtaaaagctagaagacct
gtccctaggagaacagtgcccaaacctcaagttaaaaagcaacctaagattcaacgtgga
aagaggaaaaaacaagagtcttcagatgatgatgacgacgacgatgaagctcccaaaagg
cagactcgacgaagagctgctaaaaatgtgagttacaaagaagatgatgactttgagact
gattcagatgatctcattgaaatgactggagaaggagttgatgaacagcaagataatagt
gaaactattgaaaaggtcttagattcaagactgggaaagaaaggagccactggagcatct
accactgtgtatgctgttgaagctaatggagatcctagtggtgactttgacacggagagg
gaggaaggtgaaatccaataccttatcaagtggaagggctggtcttatattcacagcaca
tgggagagtgaagaatccttacaacaacagaaagtgaagggcctaaaaaaactagagaat
ttcaagaagaaagaggacgagatcaagcaatggttagggaaagtttctcctgaagatgtt
gaatattttaattgccaacaggagctggcatcagaattaaataaacagtatcagatagta
gaaagagtaatagctgtgaagacaagtaaatctgcactgggccaaacagattttccagct
cacagtcggaagccagcgccttcaaatgagcctgagtatctgtgcaagtggatggggctt
ccctactcagagtgcagctgggaagacgaagccttgattggaaagaaattccagaactgt
atcgacagcttccacagtcgaaacaactccaaaaccattccgacaagagaatgcaaggca
ctaaagcaaagaccacgatttgtagctttgaagaagcaaccatcatacttaggaggagag
aatctggagctccgagactatcaactggagggcctcaactggcttgctcactcctggtgc
aaaagtaacagtgtaattcttgctgatgaaatgggcctaggaaagaccatccagaccata
tcgtttctctcctatctgttccaccagcaccagctctacgggccctttcttatagttgtt
cccttatccacccttacctcatggcagagagagtttgagatctgggcgccagagattaat
gtcgtggtttacataggtgacctgatgagcagaaatacgataagggaatatgaatggatt
cattctcaaactaaaaggctgaagttcaatgcacttataacaacatatgagatcctctta
aaagataagaccgtgctgggcagtattaactgggccttcctgggagtagatgaagcccat
cggttgaagaatgatgactctttattgtataaaactctgattgatttcaagtccaaccat
aggctactgatcacgggcacccctcttcagaattccctcaaggagctttggtccttgctg
cactttattatgccggagaagtttgagttctgggaagattttgaagaagaccatggaaaa
gggagagagaatggctaccagagtcttcataaggtactagagccttttcttcttcgaaga
gtcaaaaaagatgtggagaaatcccttcctgccaaggtggagcagattctcagggtggag
atgtcagcccttcagaaacagtattataaatggatcctgactaggaattacaaggctctt
gccaaaggaacaagaggcagcacatctggcttccttaatattgtgatggagctgaaaaag
tgctgcaaccactgttacctgatcaaagctcccgaggatagcgaaagggagaccggccag
gaggtccttcagtccctaattaggagcagtgggaagctgattctgttagacaaactgttg
accagactccgagaccggggaaacagagtccttatcttctctcagatggtgaggatgttg
gatatcctggctgagtacctgactataaaacactaccctttccagcgcctggatggttct
atcaagggagaaatccgaaaacaggcattggatcacttcaatgcagatgggtctgaggac
ttctgcttcctgctctccacacgggctggcggcctgggaatcaatttggcttcagcagac
acagtcgtcatctttgactccgactggaacccccagaacgacttgcaggcacaagcccga
gcacatagaattggtcagaagaagcaggtgaatatttaccgcctggttacaaaggggact
gtggaagaggagatcatagaacgggccaaaaagaagatggtgttggaccatctggtgatt
cagcgcatggataccactggcaggacagttctcgaaaacaactcaggaagatccaactca
aacccttttaataaagaagagctgacagctattttgaaatttggagcagaggatctcttc
aaagaaattgaaggagaggagtcagagcctcaggaaatggatatagatgaaattttacgc
ttagctgaaaccagagagaatgaagtatcaactagtgcaacagacgagctgctatcacag
tttaaggttgccaactttgcaacgatggaagatgaagaggagctggaagagcgtcctcac
aaggactgggatgaaatcattcctgaagagcaaaggaagaaagtagaggaggaagagcgg
cagaaggagctggaagaaatatatatgctgcctcggattcgcagttccactaaaaaggct
cagacaaatgacagtgattctgacactgagtctaagaggcaggcccagaggtcatccgct
tccgagagtgagacggatgactctgatgacgataagaagccaaagcgcagagggcgcccc
cggagtgtgcgcaaagacctcgtggagggcttcacggatgccgagatcaggaggttcatc
aaggcttataagaagtttggtctccctcttgaaaggctggagtgcatagcacgggatgct
gagctggttgataagtctgtggcagacttgaaacgcctgggagagctgattcacaatagc
tgtgtgtcagcaatgcaggagtatgaggagcagctgaaagaaaatgccagtgaaggaaaa
ggaccaggcaagagaagaggcccgacaatcaagatctctggggttcaggttaacgtgaag
tccattatccaacatgaggaagagtttgagatgctgcataaatctatccctgtggatcct
gaggaaaaaaaaaaatactgcttaacctgccgagtcaaagcagcacacttcgacgtcgag
tggggcgtggaggatgactctcgtctgctgcttggaatctacgaacatggctatggaaat
tgggagctaattaagacagacccagagctaaagctgactgataaaattctaccagtggag
acagataaaaagcctcaggggaagcagctgcagacccgagtggactacttgttgaagctg
ctcaggaagggtctggagaaaaagggcaccgtgaccagtggggaagaggctaaactaaag
aagcggaagcctcgagttaaaaaggagaataaagcacccaggctgaaggatgagcatggg
ctagagctgtctcctagacattctgacaacccttctgaagagggggaagtgaaggatgat
ggcctagaaaaaagtccaacgaaaaaaaagcagaagaagaaagagaacaaggagaacaaa
gagaaaccagtgagttctcggaaggacagggaaggagacaaagagaggaagaaatccaag
gaaaagaaagcgaaggttaaaggtggtgatgccaagtcttcaagtaaagcaaagcgatct
cagggtcctgtccacattacagcaggaagtgaacctgttcccattggggaggatgaagat
gatgatctggaccaggaaaccttcagcatttgtaaggagaggatgcggcctgtgaagaag
gcactgaaacagttggacaaacctgacaagggactcagtgtgcaagaacagctggaacac
accaggaactgcctgcttaaaattggagaccgcatagccgagtgccttaaagcttactca
gaccaggagcacatcaaattgtggaggaggaacctatggatttttgtttccaagtttaca
gaatttgatgcacgaaaactccataagttatataagatggctcataagaaaagatctcaa
gaagaggaggaacaaaagaagaaagatgattcgcttggtggtaagaaaccatttcgacca
gagacctcgggctcaagccgggattctctgatatctcagtcccatacctcacacaacctt
catcctcagaagcctcatttgcctgcctcccatggcccacagatgcatggacatccaaga
gataactacagtcatcccaacaagagacactttagtaatgcagatcgaggagactggcag
agggaaagaaagttcaactatggtggtggtaacaatgccccctgggggggtgaccggcac
catcagtatgagcagcactggtataaggaccaccactatggtgaccggagacatatggat
gctcaccgttctggaagctaccgacctaacaacatgtctagaaagagaccatatgaccag
tacaacagcgaccgagaccaccggggacacagagactattatgacaggcaccatcatgac
tccaagcgaaggaggtcagatgactttaggccccagaattatcaccagcaggattttcga
cgaatgtctgaccacagacccaccatgggttaccacggccagggaccctcagaccattat
cgctctttccacacagacaagttgggggaatataaacagcccatgccttcattgcacacc
acgctctcagaccctcgctcacccccttcccagaaatctccccatgattccaagtcaccc
ttggatcataggtctcctttggagagatcactagaacagaaaaacaacccagattataac
tggaatgttcggaaaacataa
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integrated database retrieval system
