KEGG   Arvicanthis niloticus (African grass rat): 117708186
Entry
117708186         CDS       T08817                                 
Symbol
Aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:anu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    117708186 (Aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:anu03400]
    117708186 (Aptx)
Enzymes [BR:anu01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     117708186 (Aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     117708186 (Aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     117708186 (Aptx)
DNA repair and recombination proteins [BR:anu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     117708186 (Aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     117708186 (Aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA zf-C2H2_6 Glycoamylase
Other DBs
NCBI-GeneID: 117708186
NCBI-ProteinID: XP_034357517
LinkDB
Position
5:102662866..102685970
AA seq 335 aa
MWVCWLVRQDIRHQRIKLPHLEAVVIGRSPETKIIDKKCSRQQVQLRAECNKRYVKVKQM
GVNPTSIDSVVIGKDQEMKLLPGQVLHMVNELYPYIVEFEEVAESPNPTQRKRKRSDCDS
EEMEAKSGTGLAPGSSPSQCSVPLKKGKDGITKEESLGHWSQGLKLSMKDPKVQVYKDDQ
VVVIKDKYPKARHHWLVLPWVSISSLKVVTSEHLELLKHMHTVGEKVIADFAGSSKLRFR
LGYHAIPSMSHIHLHVISQDFDSPCLKNKKHWNSFNTDYFLESQAVIKMVQEAGRVTVKD
GTCELLKLPLRCHECQQLLPSIPQLKEHLRKHWGI
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgtgggtgtgctggttggtgagacaggacatccggcaccagcgaatcaaacttccccat
ttggaagctgttgtgattggtcgaagcccagagactaagatcatagataagaaatgttcc
cgacagcaagtacagttgagagcagagtgtaacaagagatatgtcaaagtaaagcagatg
ggggtcaatcccaccagcattgactcagtcgtcattgggaaggaccaagagatgaagctg
ctgcctggtcaggttcttcacatggtgaatgaactttatccatacattgtagagtttgag
gaagtggcagagagccctaacccaacacaaaggaagaggaagagatcagactgtgatagt
gaggagatggaagctaagtctggaacagggctggcacctgggagcagccccagccagtgc
tctgtgccccttaagaagggcaaggatggaatcaccaaagaggaatcactgggccactgg
agtcaaggcttgaagctgtctatgaaagaccccaaagtgcaggtttacaaagatgatcag
gtggtggtgattaaggataagtaccccaaagcccgtcaccactggctggtcttaccgtgg
gtctccatttccagtctgaaggttgtgaccagtgaacaccttgaacttctcaaacatatg
cacactgtgggggaaaaggtgatagcagattttgctggatccagcaaactgcgcttccga
ttgggttaccatgccattcccagcatgagccacatacatcttcatgtgatcagccaggac
tttgattctccttgccttaaaaacaaaaagcattggaattctttcaatacagactacttt
ctggaatcacaagctgtgatcaagatggttcaggaagccggcagagtaactgttaaggat
gggacttgtgaactcttgaagctgcctctccggtgccatgagtgtcaacagctgctgcct
tccatcccacagctgaaagagcacctcaggaagcactggggcatatga

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