Arvicanthis niloticus (African grass rat): 117708216
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Entry
117708216 CDS
T08817
Symbol
Ifnk
Name
(RefSeq) interferon kappa
KO
K05441
interferon kappa
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04060
Cytokine-cytokine receptor interaction
anu04622
RIG-I-like receptor signaling pathway
anu04630
JAK-STAT signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
117708216 (Ifnk)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117708216 (Ifnk)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117708216 (Ifnk)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
anu04052
]
117708216 (Ifnk)
Cytokines and neuropeptides [BR:
anu04052
]
Cytokines
Interferons
117708216 (Ifnk)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
DUF5098
Motif
Other DBs
NCBI-GeneID:
117708216
NCBI-ProteinID:
XP_034357571
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All DBs
Position
5:complement(107942681..107944439)
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AA seq
206 aa
AA seq
DB search
MTPKYLWPVVLMALYILPIQSLNCAHLDQAIKENLKLLHNFIKGFPFRCIKDITNFKFPK
ETLLPYIQHMKTDINVVFHQVSALALNIFTPKSYILPVPEKDLEIIKSGLFNQAQQAQQC
FMEEKKENREEASMSQDLHSEDFLKVYLELRKYFFRIRKFLTNKKYSFCAFKIVAAEIKR
CFIIFYHFKNEIRYISESMTFKQELR
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgactccaaagtacttatggccggtggtccttatggctctgtacattctacccatccag
tctctgaactgtgctcacctggatcaggccatcaaggaaaatttgaaacttctgcacaac
ttcataaagggctttccctttagatgtataaaagatatcacaaatttcaagtttcctaag
gagactcttctgccatacatccagcatatgaaaacggacataaatgtggtcttccatcag
gtatctgctctggcactaaatattttcactcctaaaagctacatcctcccggtgccagag
aaagacttggaaattatcaaatcgggactttttaatcaagcacagcaagctcaacagtgc
ttcatggaggagaaaaaagagaacagggaggaggccagtatgtcacaagatcttcactcg
gaagacttcctgaaagtctacctggaattgagaaagtacttcttcagaatcagaaagttc
ctgacaaataagaaatacagtttttgcgccttcaagattgtcgcagcggaaataaaaaga
tgtttcatcatattttaccatttcaaaaatgaaatcaggtatatttcagaatcaatgacc
ttcaaacaagaacttagataa
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