Arvicanthis niloticus (African grass rat): 117708236
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Entry
117708236 CDS
T08817
Symbol
Magoh
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03013
Nucleocytoplasmic transport
anu03015
mRNA surveillance pathway
anu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117708236 (Magoh)
09122 Translation
03013 Nucleocytoplasmic transport
117708236 (Magoh)
03015 mRNA surveillance pathway
117708236 (Magoh)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117708236 (Magoh)
03041 Spliceosome [BR:
anu03041
]
117708236 (Magoh)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117708236 (Magoh)
Spliceosome [BR:
anu03041
]
Complex C
Other components
EJC/TREX
117708236 (Magoh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
117708236
NCBI-ProteinID:
XP_034357599
LinkDB
All DBs
Position
5:complement(42588886..42597475)
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AA seq
146 aa
AA seq
DB search
MESDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEEL
KRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLR
VFYYLVQDLKCLVFSLIGLHFKIKPI
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgacttttacctacgttactacgtgggtcacaaaggcaagttcggtcatgag
ttcctggagtttgaattccggcctgacggtaaattgcgatatgccaacaacagcaattac
aaaaatgacgtcatgatcaggaaagaggcttatgtacataaaagtgtgatggaagaatta
aagagaattattgatgacagtgaaatcaccaaagaagatgatgctctatggccccctcct
gaccgagtgggccggcaggagcttgaaattgtcattggagatgaacacatttctttcaca
acatcaaaaattggttcccttattgatgtcaaccagtccaaggatccagaaggcttacga
gtgttttattatcttgtccaggacctgaagtgtttagtcttcagtcttattggattacac
ttcaagattaaaccaatctaa
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