Arvicanthis niloticus (African grass rat): 117708250
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Entry
117708250 CDS
T08817
Symbol
Arhgef16
Name
(RefSeq) rho guanine nucleotide exchange factor 16
KO
K20688
Rho guanine nucleotide exchange factor 16
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117708250 (Arhgef16)
Membrane trafficking [BR:
anu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117708250 (Arhgef16)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
SH3_9
SH3_1
SH3_2
SOS1_NGEF_PH
RHG20_PH
IQ_SEC7_PH
ECT2_PH
SH3_16
SH3_KALRN
Motif
Other DBs
NCBI-GeneID:
117708250
NCBI-ProteinID:
XP_034357616
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All DBs
Position
5:1972461..1986288
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AA seq
717 aa
AA seq
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MSQRYSDSSLDEKLLEYRFHAELRLDANGNPMPGLPMVRSSLNARTNAAFEPEASEPLPP
PPPPSSPTPGDEEPRPIILSTQSPAALKMGTQQLIPKSLAVASKAKTKSPARHQSFGAAV
LSKEAARRSPQLFSAPSFSLDDMDMDTVTAGNLKRNLRNQSYRAAMKGLGPLSSKENSVH
LGPKLQALAEESAQPPARYLAKNKKTLGRKRAHKGSFKDDPQLYQEIRERGLNTSQESDD
DILDEPSSPGGTQRADTTIVVKSYRPAQLTWSQLPEVLESGVLDTLSVEERKRQEAIFEI
LTSEFSYLHSLSILVTEFLQSRELRATMTQMEHHHLFSNILDVMSASQKFFEALEQRHKA
QVCVEDISDILEDHAERHFHAYVAYCSNEVYQQRTLQKLSNSNAAFREVLREIEKRPACG
GLPMISFLILPMQRVTRLPLLTDTLCLKTKGHPERYKAASRALKAISKLVKQCNEGAHKM
ERTEQMYTLHMQLDFGKVKSLPLISASRWLLKRGELFLLEESSIFRKIGSRPTCYLFLFN
DVLVVTKKKSEESYLVQDYAQLDHVQVGKVDPSEPSLPGGSSRSSSVPYPFEVNLLHNSE
GRQEKILLSSDSASDRARWITALTYKERQWQDITNKGELPQVEVTKAYFAKQADEITLQQ
ADVVLVLQEEDGWLYGERLRDGETGWFPESFAHSITSRMAVEGNVRRMERLRVETDV
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaggtattctgacagctctctggatgagaaactactggagtatcgcttccat
gcagaactgagactcgatgccaatgggaaccccatgcctggactccccatggtccggagc
tccttgaacgcccgaaccaatgctgcctttgagccagaagcctcagaacccctaccgccg
ccaccgccaccatcatctccgacgccaggagatgaggagcctcggcccatcatcctcagc
acgcaaagccccgcagccctcaagatgggcacacagcagctcatccccaagagcttggct
gtggccagcaaggccaagaccaagtccccagcccgccaccagagctttggggcagccgtg
ctcagcaaggaggctgcaaggcggagtcctcagctcttctcagcccccagcttctctttg
gatgacatggatatggacacggttaccgccgggaatctgaagcgcaacctgaggaaccag
tcctacagggcagccatgaagggcctggggccactcagtagcaaggagaactcggtccat
ctcggccccaagctccaggctctcgctgaggagtctgctcagcctcctgcccggtaccta
gccaagaataagaaaactctggggcggaaacgtgcacacaagggctctttcaaagatgac
ccccagttgtaccaggagatccgagagcggggtttgaacacgagtcaggagtctgatgat
gacatactggatgagccctcgagcccagggggaactcagagagcagacaccaccatcgtg
gtcaagagctatcggcctgcccagctcacctggagccagctcccagaggtgctggagtca
ggtgtcctagacacactgtcagtggaagaacggaagaggcaggaggccatcttcgagatc
ctcacgtctgagttctcctatctgcacagcctgagcatcctggtgactgagttcctgcag
tcccgggagctgagggccactatgacccagatggaacaccaccacctcttctccaacatc
ttggatgtgatgtctgccagtcagaagttctttgaagccctggagcagcgccacaaagct
caggtgtgtgtggaggacatcagcgacatcctggaggatcacgccgagcgtcatttccac
gcttacgtcgcctactgctccaacgaggtctaccagcaacgtaccctgcagaagctgtcg
aacagcaacgcagccttccgggaagttctgagggagatcgagaaacggcctgcctgtggg
ggcctgcccatgatctctttcctgattctccccatgcagagggtgacccggctgcccctg
ctgacagatacgctctgcctgaagacaaaaggccatcccgaacggtataaagccgccagc
cgagccctgaaggccatcagcaagctggtgaagcagtgtaacgagggggcccacaagatg
gagcgcacagagcagatgtacacgctgcacatgcagctggacttcggtaaggtcaagtcc
ctcccgctcatctccgcctcccgctggctgctgaaacgtggggagctctttctcttggag
gaatccagtatctttaggaaaattggcagccgacccacatgctacctgttcctgttcaat
gatgtcctggttgtcaccaagaagaaaagtgaggaaagctacctggtccaagactatgcg
cagctagaccacgtacaggtcgggaaggtggacccctcggagccttcactgccaggaggc
agcagccgcagctcctccgtgccctacccgttcgaagtgaacctgctacacaacagtgag
ggccgccaggagaagatactgctgtcgtctgactctgcgagtgaccgggcccggtggatc
acagcacttacctacaaggagagacagtggcaggatatcaccaacaaaggagaactgccc
caggtggaggtcaccaaggcatactttgccaagcaggccgatgagatcacactgcaacag
gctgacgttgttctggtccttcaggaagaggacggctggctatatggcgagcgtctccgg
gacggagagacgggctggtttcccgagagctttgctcactccatcaccagccgtatggcc
gtggaaggcaacgtgcgcaggatggagcggctgcgggtggaaacggatgtgtag
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