Arvicanthis niloticus (African grass rat): 117708290
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Entry
117708290 CDS
T08817
Symbol
Zc3h12a
Name
(RefSeq) endoribonuclease ZC3H12A isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117708290 (Zc3h12a)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117708290 (Zc3h12a)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
zf-CCCH_2
UBA_N4BP1
Motif
Other DBs
NCBI-GeneID:
117708290
NCBI-ProteinID:
XP_034357688
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Position
5:29356627..29383971
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AA seq
597 aa
AA seq
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MSDPCGTEPVQETSPTMSLWSLEDRHSCQGRPQPDQDPVAKEASASELQMKVDFFRKLGY
SSSEIHSVLQKLGVHADTNTVLGELVKHGSATERECQASTDPCPQLPLVPRGGSTPKPST
LEPSSLPEEDKEGSDLRPVVIDGSNVAMSHGNKEVFSCRGILLAVNWFLERGHTDITVFV
PSWRKEQPRPDVPITEQHILRELEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAFESDGV
VVSNDTYRDLQGERQEWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPLPS
EHRKQPCPYGRKCTYGIKCRFFHPERPSRPQRSVADELRANALLSPPRTPVKDKSSQRCS
PASQPSSVSLEAEPGSPDGKKLGARSSPGPHQEGSTQTCATASRSLPMSGSSFGPTEWLP
HTLDSLPYTSQECLDSGIGSLESQMSELWGLRGSSPGESGPSRGPYVGYHSYGSKLPAAP
PFSPFRQAMGAGHFSVPTDYVPPPPTYPAREYWSEPYPLPPPTPVLQETQRPSPGASGGP
WGRVSDLAKERAGVYTKLCGVFPPHLVEAVMGRFPQLLDPQQLAAEILSYKSQQLNE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacccctgtggaaccgagcctgtccaagaaaccagccccaccatgagtctgtgg
agtcttgaggacagacacagctgccagggtcgacctcagccagaccaggatcctgtggct
aaagaggcctctgcttccgaactgcagatgaaggtggactttttccgtaaactggggtac
tcgtcctctgagatccacagcgtcctgcagaagctgggagtccacgcagacaccaacacg
gtgctgggggagctggtgaagcatggttcagctactgaacgagagtgtcaggcttcgaca
gacccctgcccccagctccctctggtgccccggggtggaagcacccccaagccttccact
ctagaaccctcctcactccccgaggaggacaaagaaggcagtgacctgagaccggtggtc
atcgatgggagtaatgtagccatgagccatgggaacaaggaagtcttttcttgccggggc
attctgctggctgtgaactggtttctggagcggggccatacagacatcactgtgtttgtt
ccatcttggaggaaggaacagcctcgaccagatgtgcccatcacagagcagcacattctg
cgggaactagagaaaaagaagatcctggtgttcacgccgtccaggcgggtcggcggcaag
cgtgtggtgtgctatgacgaccgcttcattgtgaagctggccttcgaatctgatggagtg
gtggtctccaatgacacgtatcgggacctccaaggcgagaggcaggagtggaagcggttc
atcgaggagcggctactcatgtactcctttgtcaatgacaagttcatgccccctgacgac
cctttaggacggcatgggcctagcctggacaacttccttcgtaagaaaccactgccttct
gaacaccggaagcagccatgcccctatgggagaaaatgtacgtatgggatcaagtgccga
ttcttccaccctgagcggccaagccgcccccagcgctctgtggccgatgagctccgagcc
aacgccctcctctcaccccccaggactccagtcaaggacaaaagtagccagaggtgttcc
cctgcctctcagcccagctctgtgtccctagaggctgaaccaggcagcccagatgggaaa
aaactgggtgccaggtcatccccaggcccccaccaagaaggctcaacacagacctgtgct
acagccagcaggagcctccctatgagtgggagcagcttcgggcccacagagtggctccca
cacaccctggactcactcccatacacctcccaggagtgtcttgattcaggcattggctcc
ctggagagccagatgtcagaattatggggtttgcgaggaagcagccctggggagtcaggc
ccctctcggggcccttatgttggttatcatagctatgggtccaagctcccagcagcacct
cccttttctccctttagacaagccatgggtgctggccacttcagtgtccccaccgactat
gtgcccccaccacccacctacccagccagagagtactggtctgaaccatatccattgcct
ccacccactccagtccttcaggagacccagagacccagcccaggggccagtgggggcccc
tggggcagggtgagcgacctggccaaagaaagggctggtgtgtacacaaagctgtgcggt
gtctttcccccacacctcgtagaagctgtgatgggacgcttcccacagctcctggacccc
cagcagctggccgctgagatcctttcttacaagtcccagcagctcaatgagtaa
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