Arvicanthis niloticus (African grass rat): 117708323
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Entry
117708323 CDS
T08817
Symbol
Ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04120
Ubiquitin mediated proteolysis
anu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117708323 (Ube4b)
04120 Ubiquitin mediated proteolysis
117708323 (Ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117708323 (Ube4b)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117708323 (Ube4b)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
U-box type E3
117708323 (Ube4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
117708323
NCBI-ProteinID:
XP_034357766
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All DBs
Position
5:6890238..6982525
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AA seq
1173 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASVPGPSQSLGLNVHNM
TPATSPIGAAGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIATAARSPD
RNLVLNTGSSSGTSPMFCNLGSFSASSLSSLGASGGASNWDSYSDHFTIETCKETDMLNY
LIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSLQQPSFLV
PYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFKYPLMALG
ELCETKFGKTHPMCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVE
KYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYMAAIVNANM
KKAQMQADDRLVSTDGFMLNLLWVLQQLSTKIKLETVDPTYIFHPRCRITLPNDETRINA
TMEDVNTWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT
VEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGL
LIQLMLRILDPAYPDVTLPLNSEVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCTQ
DIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPSVQPRTQKFFEMIENHPLSTKLLVPS
LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINM
LINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLAL
ATETVDMFHLLTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK
KLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAE
KVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDP
FNRQMLTESMLEPVPELKEQIQAWMREKQSSDH
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgacgagattcgacggaggcggctggcacgacttgctggtgga
cagacctcccagccgaccaccccacttacatctccccagagagagaaccctccgggacct
ccaatagctgcatcagtcccaggcccctcccagagtcttggtctcaatgtccacaacatg
accccagctacctcccccataggtgcagcaggagttgcccatcggagccagagcagcgag
ggtgtcagttctctgagcagctccccttccaacagccttgagacgcagtctcaatccctg
tcacgctcccagagcatggacatcgatggtgtctcctgtgagaaaagcatgtcccaggtg
gatgtggattcaggaattgagaatatggaggtggacgagaacgaccgaagagaaaaacgg
agcctgagtgacaaggagccttcttcaggtcctgaggtgtctgaagagcaggccttacag
ctggtctgtaagatcttccgtgtctcctggaaggaccgcgacagagatgtcatctttctt
tcttctctctctgcgcagtttaaacagaacccaaaagaagtgttctctgactttaaggat
ctgattgggcagattttaatggaagtgctgatgatgtccacccagacacgagatgaaaac
ccatttgccagtctgacagccacatcccagcccattgccacggcagctcggtcaccagac
agaaatctcgtgctgaacactggctccagttcaggaacaagccccatgttctgcaacttg
ggttccttcagcgctagctccttgtctagtttgggagcctctggtggagcaagtaactgg
gattcgtacagtgaccatttcaccattgaaacctgcaaagagacagacatgctgaactac
ctcattgagtgctttgaccgagttggaatagaggaaaaaaaagcaccaaagatgtgcagc
cagccagcagtcagccagcttctgagtaacatccgctcgcagtgcatctcccacaccgcg
ctagtactacaagggtcccttacacagcccaggtccttgcaacagccatccttccttgtg
ccgtacatgctctgcaggaatctcccatacggcttcattcaagagctggtgaggaccact
caccaggatgaagaggtgttcaagcagatctttatccccattttacaaggcctggcgctt
gctgccaaagagtgctccttggatagcgactactttaagtaccccctcatggcactgggt
gaactctgtgaaaccaagtttgggaagacacaccctatgtgcaatttggttgcctcttta
cccctgtggttgccgaaatccttaagccctggttctgggcgggagctgcagagactttcc
tacctaggggcctttttcagcttctcagtcttcgcggaggatgatgcaaaggtggttgag
aaatacttctcagggcctgccattaccctggagaacacccgcgtggtcagccagtcacta
cagcattacctggagctgggacggcaagaacttttcaagattctacatagtattttgtta
aacggcgaaacccgtgaagcggctctcagttacatggcggccattgtcaatgccaatatg
aagaaagcccagatgcaggcagatgatcggttggtgtctacagatggatttatgctgaat
ctcctttgggtcctgcagcagctaagtacaaaaatcaagttagaaacagtcgaccccact
tacatattccacccgagatgtcggatcactctcccgaacgatgagacacggataaatgca
acgatggaggatgtgaatacgtggctgacagagctctatggcgatcagcctccgttttct
gagccaaaattccctactgaatgtttctttctcaccctgcacgctcaccacctctctatt
ctgcctagttgtcgtcgctacattcgccgactccgagccattcgtgagctcaatagaacc
gtggaagatttgaaaaataatgaaagccagtggaaagattccccactggccaccagacac
cgcgagatgttgaagcgctgtaaaacccagctgaagaaactggtacggtgcaaggcctgt
gctgacgctggcttacttgacgagagcttcctaagaagatgtctgaatttttatggcctt
ctcattcagctgatgctgcgcatcctggaccctgcatatcctgacgtaacactgccttta
aattcagaagtccccaaggtatttgcagcattgcctgagttttatgtagaagacgttgct
gaatttttattttttattgttcaatactctcctcaggtgctgtacgagccctgcactcag
gacattgtcatgttcctcgtggtcatgctgtgcaaccagaactacatccggaacccttac
ctagtggccaagctggtggaggtcatgtttatgaccaacccctctgttcagccgagaact
cagaagttttttgagatgattgagaaccatcctctctctaccaaattgctggtaccttcc
cttatgaagttctatacagatgtggagcacactggagccaccagcgagttctatgacaag
ttcacaatccgctatcacattagcactatttttaaaagcctttggcagaacatagctcac
cacggcaccttcatggaggagttcaattctggaaagcagttcgttcggtatatcaatatg
ctgataaatgacacgacctttttactggacgaaagtttggagtctctgaagcggatccat
gaagtgcaagaagagatgaagaacaaagagcagtgggaccagctgcctcgggatcagcag
caggcccggcagtctcagcttgcccaggatgagcgtgtttcccgttcttatcttgccctg
gcgactgaaaccgtggacatgttccatctcctcaccaagcaagtccagaagccattcctg
aggccagaacttggtccccgattagcagccatgctgaactttaacctacagcagctctgc
ggacccaagtgccgggacctgaaggttgaaaacccggagaagtatggctttgagccaaag
aagctgttggaccagctgacggatatttacttacagctggactgtgctcgctttgctaaa
gccatcgctgatgaccagcgatcctacagcaaggaactgtttgaagaagtcatttcaaag
atgcggaaggcaggaatcaaatccaccatcgcaatagaaaagtttaagcttcttgcagag
aaagtggaggaaatcgtggcaaagaatgcgcgggcagaaatagactacagcgatgcccca
gacgagttcagagaccctctgatggacaccctgatgaccgatcccgtgagactgccctct
ggtaccatcatggaccgctctatcatcctgcggcatctgctcaactcccccactgacccc
ttcaaccgccagatgctgactgagagcatgctggaaccagtgccagagctgaaggagcag
attcaggcatggatgagagagaagcagagcagtgaccactaa
DBGET
integrated database retrieval system
