KEGG   Arvicanthis niloticus (African grass rat): 117708342
Entry
117708342         CDS       T08817                                 
Symbol
Per3
Name
(RefSeq) period circadian protein homolog 3 isoform X1
  KO
K21945  period circadian protein 3
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu04710  Circadian rhythm
anu04713  Circadian entrainment
Brite
KEGG Orthology (KO) [BR:anu00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    117708342 (Per3)
   04713 Circadian entrainment
    117708342 (Per3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:anu03400]
    117708342 (Per3)
DNA repair and recombination proteins [BR:anu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    117708342 (Per3)
SSDB
Motif
Pfam: Per3-like_PAS-A Period_C bHLH_PER PAS_3 PAS_11 PAS DNA_Packaging
Other DBs
NCBI-GeneID: 117708342
NCBI-ProteinID: XP_034357814
LinkDB
Position
5:5278891..5319810
AA seq 1126 aa
MDPCGDPALPGGDCPQTRGPGLQGAPGQEGPLQGTCVDSSHSEHEDRNRMSEELIMVVQE
MKKYFPAERHTKPSTLDALNYALRCVHSVQANSEFFQSLSPHGARQADVTVYSLEELTSL
ASEHTSKNTDTFVAVFSFLSGRLVHISEQAALILNSKKGFLKSLHFVDLLAPRDVRVFYA
HTAPTQLPFWNNWTQKASQYECAPVKPFFCRICGGGDREQKRHYSPFRILPYLVHVHSSA
QPEPEPCCLTLVEKIHSGYEAPRIPIDKRIFTTTHTPGCVFLEVDERAVPLLGYLPQDLI
GTSILTYLHPEDRPLMLAVHQKVLKYVGHPPFEHSPVRFCTQNGDYVILDSSWSGFVNPW
SRKVSFIIGRHKVRTSPLNEDVFATRIKKAASNDKDITELQEQIHKLLLQPVHASASSGY
GSLGSSGSQEQHISISSSSESNGHCAEEGQQEQMTLQQVYASVNHIKNVGQQLYIESMAR
SSVKPVTETCAEPQGGDEQKDFSSSQTLNNKSMDTGSSGDLQQEQHSSSYQQMNCIDSVL
RYLTSYNLPSLKRKCISCTNTSSSSEEAKPNPEADSSLRDTEQPLDIQKQETTGPSTDAK
GGATQTLSTTALSMASGISQCSCSNTTACIPPLQSAESVAVACKPWALRTKASHLAAGGF
KHVGLTAAVLSAHTQKEEQSYVDRFREKLLASPYSCYLQQESRNRTKYSRVQAGSTPKHS
RCAGSERRKHKRKKLLTPVDTRSSSAHLCPHVRGLFPDGQHWNPSVIPSPHAAGLAFPSA
LVVPGQTPYLLPSFPFQDMASQGVGDSAAWGAAAACPPLSPGPQTVSALPSPGPQSVSAL
PSAYLDTLMTIFLHNTPLFPLWPASFSPYPFLAETGSSELAPLVPATAPNLEPTSSDQGQ
RRVEENWETHSEELPFISSRSSSPLQLNLLQEEMPAPSESEEAVRRGAVPDAKHHCVTGH
SSGQSCHCATGELATATVQQESPAAASGSSASSLYFSNSDYASEVSENGRRSQDRQRDKA
FPGAAEESIWRMIERTPECVLMTYQVPERGRDEVLKQDLEKLHSMEQQQPQFSPAQKEEL
AKVHSWIHRHTAPQERHLQSCVTYEDRGSVSNTAEVPEQHPSEDTN
NT seq 3381 nt   +upstreamnt  +downstreamnt
atggatccctgtggagacccggcactgcccggtggcgactgtccccagactaggggaccg
gggctccagggggcgcctggccaggagggtcctctgcagggcacttgcgtggacagcagc
cacagtgaacacgaagaccgaaacagaatgtctgaagaacttattatggttgtccaagaa
atgaaaaagtatttcccagccgagagacacactaaacccagcaccctagatgcccttaac
tatgccctgcgctgtgtacatagtgtgcaagcaaacagtgaatttttccagagtctcagt
ccacatggagcacgtcaggcagatgtgactgtatacagtcttgaggagctgacctctctg
gcttctgaacatacttccaagaacacagacacctttgtggcagtgttttcgtttctgtct
ggaaggttagtgcacatttctgagcaggctgctctgatcctgaattctaagaaaggtttc
ctcaagagcttgcactttgtcgacttgcttgcccctcgagatgtaagggtgttctacgca
cacactgctccaactcagcttcctttctggaacaactggacacaaaaagcctcgcagtat
gaatgtgcaccagtgaaaccctttttctgcagaatctgtggaggtggagacagagagcag
aagaggcattactccccattccggatcctcccctatttggttcatgtacatagctctgcc
cagccagaaccagagccttgctgtctaacactggttgaaaagattcactctggttacgaa
gctcctcgaattcctatagataaaagaatttttaccacaacacacacgccaggatgtgtg
tttcttgaagtagatgaaagagcagtgcctttgctgggttacctacctcaggatctgatt
ggaacatcgatcttaacatacttgcacccagaagatcgacctctgatgcttgccgtacac
caaaaagttttaaagtatgtgggccaccctccatttgaacactcacctgtcagattctgc
actcagaatggagattatgtcatcctggattccagctggtctggctttgtgaacccctgg
agccggaaggtctccttcattattggtcggcataaagtccgaacaagtccattaaatgaa
gatgtttttgccaccagaataaaaaaggcagccagtaacgacaaagacataacagaatta
caagaacaaattcacaaacttctcttgcagccagttcatgctagtgcttccagtggctac
gggagcctgggcagcagcggctcacaggagcagcacatcagcatctcctcttcgagtgag
tcaaatggacactgtgcggaggaaggccagcaggagcagatgaccctgcagcaggtctat
gccagtgtaaaccatattaagaatgtgggccaacagctctacattgagtcgatggccaga
tcatcggtgaagccagtgacggagacttgcgcggaaccgcagggtggtgatgagcagaag
gacttctcttcctctcagacactgaacaataaaagcatggataccggttccagtggcgat
ctgcagcaagagcagcacagctcgtcctatcagcagatgaactgtatcgacagtgtcctc
aggtacctgacaagctacaacctcccatccttgaaaagaaagtgcatctcctgcacaaac
acatcttcatcctcagaagaagccaagccaaacccggaggccgacagtagcctgcgagac
actgaacagcctctggacatacagaaacaggaaacaactggaccatccacagatgccaaa
ggaggtgccacacagaccctgtccaccactgcactgagcatggcgtctggcataagccag
tgcagctgcagcaacaccactgcctgcatcccacccctacagtcagcagaaagtgttgcc
gtagcgtgtaagccctgggccctgagaacgaaggcctctcacctggccgcaggaggattt
aagcacgtggggctcacagcggctgtcctctccgcacacacacagaaggaggagcagagc
tatgttgacaggttccgggaaaagctcctggcctcaccctacagctgctatcttcagcaa
gaaagcagaaaccgtactaagtactcccgtgttcaagcagggtccacccctaagcacagc
agatgtgcggggagtgagagacggaagcacaaacggaagaagttgctgacacctgtggac
accagaagctccagtgcccacctctgtccccatgtcagaggactctttccagatgggcag
cactggaacccttccgttatcccctctcctcatgctgcaggcctagctttcccctcagcc
ctggtagttcccggccagacaccttatctccttccctcttttcccttccaagatatggcc
tctcagggagtaggggactctgcagcctggggagctgcagctgcatgtccacctctgtcc
cctggccctcagactgtctccgcactcccttcccctggccctcagtctgtctccgcactc
ccttctgcttacttggatactttgatgaccatcttcctgcacaacacccctctctttcct
ctctggccggcatcattctctccatatccattcctggccgagacaggttcttctgaactg
gcacccttagtaccagcaacggctccaaacctggaaccaacctcttcagaccaagggcaa
aggagagtggaggagaattgggagacacacagtgaagagcttccgttcattagctcacgg
agcagttcaccattgcagttaaatttactccaggaagaaatgcctgcaccatcagagtct
gaagaagcagtgagaaggggcgccgtcccagatgctaagcaccactgtgttacaggtcac
agtagcggtcagagctgtcactgtgccaccggtgagctggctacagcaacagtgcagcag
gagtctcctgcagctgcctcaggaagcagtgccagcagtctgtacttcagtaacagtgac
tacgcttctgaagtctctgaaaatggacggaggtcacaggatagacagagagacaaagcc
tttcctggggcggctgaagaatccatctggagaatgatagaacggacgccagagtgtgtt
cttatgacataccaggtgccggagaggggtagagatgaggtgctcaagcaagacctggaa
aagcttcacagcatggagcagcagcagccccagttctcacctgcccagaaggaggagctg
gccaaggtgcactcctggatccacaggcacactgcccctcaggagagacacctccagagc
tgtgtcacctatgaagacagaggttcagtcagcaacactgcagaggtccctgaacagcac
ccatcagaagacaccaattga

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