Arvicanthis niloticus (African grass rat): 117708434
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Entry
117708434 CDS
T08817
Symbol
Ago1
Name
(RefSeq) protein argonaute-1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117708434 (Ago1)
03036 Chromosome and associated proteins [BR:
anu03036
]
117708434 (Ago1)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117708434 (Ago1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117708434 (Ago1)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
117708434 (Ago1)
microRNA pathway
RISC loading complex
117708434 (Ago1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
117708434
NCBI-ProteinID:
XP_034357947
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Position
5:28060380..28091976
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AA seq
857 aa
AA seq
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MEAGPSGAAAGAYLPPLQQVFQAPRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIK
PDKCPRRVNREVVEYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGE
GKDRIFKVSIKWLAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFF
SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRN
IDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQ
TVECTVAQYFKQKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS
TMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLPAPILQYGG
RNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAG
MPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGM
ATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPP
AGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPT
RIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKNE
RIGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQIL
TYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHISGQSNGRDPQAL
AKAVQVHQDTLRTMYFA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgggaccctcgggagcagctgcaggcgcctacctgcctcccctgcagcaggtg
ttccaggcgcctcgccggcctggcattggcactgtgggcaagccaatcaaacttctggcc
aattactttgaggtggacattcctaagattgacgtttaccattacgaggtggacatcaag
ccggataagtgtcctcgcagggtcaaccgggaggtggtggaatacatggtccagcatttc
aaaccgcagatctttggggatcgcaagcctgtgtacgatggaaagaagaacatttacact
gtcacagcactgcccattggcaatgagagggttgactttgaggtgacaatccccggggaa
gggaaagatagaatttttaaggtctccatcaagtggctagccattgtgagctggcgcatg
ctgcatgaagccttggtcagcggccagatccctgtgcccttggagtctgtgcaagccctg
gatgtggccatgaggcacctggcatctatgaggtacacccctgtgggccgctccttcttc
tcaccgcctgagggctactaccacccgctggggggtgggcgcgaggtctggttcggcttt
caccagtctgtgcgccctgccatgtggaagatgatgctcaacattgatgtctcagccact
gccttctacaaagcacagccagtgattgagttcatgtgtgaggtcctggacatcaggaac
atagatgaacaacccaagcccctcacggattcccagcgtgttcggtttaccaaggagata
aaaggcctgaaggtggaagtgacccactgtggacagatgaagaggaaataccgcgtgtgt
aatgttacccgacgccctgctagccatcagacgtttcccttgcagctggagagtggacag
actgtggagtgcaccgtggcacagtatttcaagcagaaatatagcctccagctcaagtat
ccccacctgccctgcctacaagttgggcaagaacagaagcatacctatttgcccctcgag
gtctgtaacattgtggctgggcagcggtgcattaagaagctgactgacaaccagacttca
accatgataaaagctacagctaggtcggccccagacagacaggaggagatcagtcgcctg
atgaagaatgccagctacaacttggatccctacatccaggaatttggaatcaaagtgaag
gatgacatgacggaggtgacggggcgagtgctgccggcgcccatcttgcagtatggcggc
cggaaccgggccattgctacacccaaccaaggtgtctgggacatgcgtgggaaacagttc
tacaatgggattgagatcaaagtctgggccatcgcctgcttcgcaccccaaaaacaatgt
cgagaagaggtgctcaagaacttcacagaccagcttcggaagatttccaaggatgcgggg
atgcccatccagggtcagccatgtttctgcaaatatgcacagggggcagacagcgtggag
cccatgttccggcatctcaagaatacgtactctggactacagctcattatcgtcatcctg
cccgggaagacaccagtgtatgctgaagtaaaacgtgtcggagatacactcttgggaatg
gcaacgcagtgtgtgcaggtgaagaacgtggtcaagacctcacctcagactctgtccaac
ctctgcctcaagatcaatgtcaaactcggtggcattaacaacatcctagtcccacaccaa
cgctctgctgtgtttcaacagccagtgattttcctgggagccgacgttacacacccccca
gctggggatgggaagaaaccgtctatcacagcagtggtaggcagtatggacgcacacccc
agccgatactgtgccaccgtgcgtgtgcagcgcccacggcaggagatcatcgaagacttg
tcctatatggtgcgcgagctgctcatccagttctacaagtccacccgcttcaagcccacc
cgcatcatcttctaccgagatggcgtccctgagggccagctgccccagatccttcactat
gagctgcttgccattcgagacgcatgcatcaaactggaaaaagactaccagcctgggatc
acatatattgtggtgcagaagcgccatcacacccgcctcttttgtgctgacaagaatgag
cggattgggaagagtggtaacatcccagcagggaccactgtggacaccaatatcactcac
ccatttgagttcgacttctatctgtgcagccatgcaggcatccagggtaccagccgacca
tcccattattatgtcctttgggatgacaaccgtttcacagcagatgaactccagatcttg
acataccagctgtgccacacttatgtacgatgcacacgttctgtctctatcccagcacct
gcctactatgctcgtttggtggctttccgggcacgataccacttggtggacaaggagcat
gacagtggagaggggagccacatatcggggcagagcaatgggcgagatccccaggccctg
gccaaagctgtgcaggttcaccaggacactctccgcaccatgtacttcgcttga
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