Arvicanthis niloticus (African grass rat): 117708472
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Entry
117708472 CDS
T08817
Symbol
Rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117708472 (Rnf20)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117708472 (Rnf20)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
117708472 (Rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
BRE1
zf-rbx1
Toxin_SdpC
Motif
Other DBs
NCBI-GeneID:
117708472
NCBI-ProteinID:
XP_034358020
LinkDB
All DBs
Position
5:complement(94843152..94871907)
Genome browser
AA seq
973 aa
AA seq
DB search
MSGIGNKRAAGEPGTSVPPEKKTAVEDSGTTVETIKLGGVSSTEELDIRTLQSKNRKLAE
MLDQRQAIEDELREHIEKLERRQATDDASLLIVNRYWSQFDENIRIILKRYDLDQDLGDL
LTERKALVVPEPEPDSDSNQERKDERERGDGQEPAFSFLATLASSSSEEMESQLQERVES
SRRAVSQIVTVYDKLQEKVDLLSRKLNSGDNLIVEEAVQELNSFLAQENVRLQELTDLLQ
EKHHTMSQEFCKLQGKVETAESRVSVLESMIDDLQWDIDKIRKREQRLNRHLAEVLERVN
SKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAQNRHCELEKLRQDFEEVTTQN
EKLKVELRSAVEEVVKETPEYRCMQSQFSVLYNESLQLKAHLDEARTLLHGTRGTHQRQV
ELIERDEVSLHKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLI
SSLQNHNHQLKGEVLRYKRKLREAQSDLNKTRLRSGSALLQSQSSTEDPKDEPTELKQDS
EDLATHSSALKASQEDEVKSKRDEEERERERREKEREREREREKEKEREREKQKLKESEK
ERDSIKDKEKGKHEDGRKKEAEVIKQLKIELKKAQESQKEMKLLLDMYRSAPKEQRDKVQ
LMAAEKKSKAELEDLRQRLKDLEDKEKKENKKMADEDALRKIRAVEEQIEYLQKKLAMAK
QEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKE
ELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRKAMEAAQ
LADDLKAQLELAQKKLHDFQDEIVENSVTKEKDLFNFKRAQEDISRLRRKLETTKKPDNV
PKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNA
AFGANDFHRIYIG
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggattggaaataaaagagcagctggagagccaggcacatctgtgcctccagag
aagaagacagccgttgaagattcagggaccaccgtggaaacaattaagctaggaggcgtc
tcttcaacggaggaattagacattagaacactacaatccaaaaatcgtaagctagcagaa
atgctagatcagcggcaggccattgaagacgagcttcgggaacacattgaaaagctggag
cgacggcaggccactgatgatgcctcactgttgattgtgaaccggtactggagccagttt
gatgaaaacatccgaatcatccttaaacgttatgatctggaccaggatttgggagaccta
ctcacagaacggaaagccttggttgtgccagaaccagaacctgactctgatagcaatcaa
gagcgcaaagacgaacgggagagaggggatgggcaagagccagctttctctttccttgct
actttggctagcagttccagtgaagagatggaatctcagcttcaggagcgtgtagagtcc
tcccgccgtgctgtgtctcagattgtgactgtctatgataaattgcaagaaaaagtggat
ctcttatcccggaaactgaacagtggagataacctgatagtggaggaagcagtgcaggag
ctgaactccttccttgcgcaagagaatgtgaggctccaggagctgacagacctccttcag
gagaagcatcacaccatgtctcaggagttctgtaagctgcagggtaaagtagagacagct
gagtcacgagtgtccgtcttggagtccatgattgatgacctgcagtgggatattgacaaa
attcgaaaaagagaacagcgtctcaaccggcatttggctgaagtcctagagcgggtgaat
tcaaaaggctataaagtatatggagcagggagcagtctctacggaggcacaatcaccatc
aatgcccggaagtttgaggaaatgaatgcagaacttgaggagaacaaagagttggctcag
aaccgacattgtgagctagagaaacttcgtcaagactttgaagaggtcactacacagaat
gaaaagttgaaggtggaattgcggagtgcagtggaggaggtggttaaggaaaccccagag
tatcgctgcatgcagtcacagttctctgtcctgtataatgagagtctacagttgaaggcc
cacttggatgaagctcggaccctgcttcatggtacccggggaactcaccagcgccaggtt
gaactcattgagcgagatgaagttagtctgcataagaagctgagaactgaagtaattcag
ctggaggataccttggcccaggtccgcaaggagtatgagatgttgaggatagagtttgag
cagacccttgctgccaatgaacaagcaggccccatcaaccgggaaatgcggcatctcatt
agcagcctgcagaatcacaaccaccagctgaagggggaggtcctgaggtataaacggaaa
ctgagagaggcgcagtccgacctgaataagacgcgtctgcgtagtggcagtgccctcctg
cagtctcagtctagtaccgaggaccccaaggatgaacccaccgagctgaagcaagattct
gaagacttagccactcattcctcagcattgaaggcatctcaggaggatgaagttaagtcc
aaacgggatgaagaagagagggaacgagaaaggagggagaaagaaagagagcgagaacga
gaacgtgaaaaggaaaaggagagagaacgagagaaacagaaactgaaagagtcagaaaaa
gagagagattctattaaggataaagagaaagggaaacatgaggatggaagaaagaaagaa
gcagaagtcatcaagcagctgaagattgaactcaagaaagcacaagagagccagaaggag
atgaaactgctgctggatatgtatcgctctgcccccaaggagcagagggacaaagtgcag
ctgatggcagctgagaagaagtcaaaggcagagttggaggatctcagacaaagactcaag
gatctggaagataaggagaagaaagagaacaagaaaatggctgatgaggacgctttgagg
aagatccgggcagtggaggagcaaattgaatatttgcagaagaagctggctatggccaaa
caggaggaagaagctctcctgtctgagatggatgtcacaggccaggcctttgaggacatg
caggagcagaacatccgtttgatgcagcagttgcgggagaaggatgatgcaaacttcaag
ctcatgtcagagcgaatcaagtctaatcagatccataagttacttaaagaggaaaaagaa
gagttagctgaccaggttttgacgctgaagactcaggtcgatgcccagttacaggtagta
agaaaactggaagagaaggagcacctgcttcagagtaacattggcacaggggagaaggag
ctgggtcttaggactcaagccttggagatgaataaacgcaaggcaatggaggcagcccag
cttgcagatgacctcaaagcacagctggaactggctcagaagaagctccatgattttcag
gatgaaatcgtggagaacagtgttaccaaagaaaaggacttgttcaatttcaaacgagca
caggaagacatctctaggctccgcagaaagctggagaccaccaagaagccagacaatgtg
cctaagtgtgatgagattctgatggaggagataaaggactacaaggcacggctgacctgc
ccttgctgtaacatgcgtaaaaaggatgcagtacttaccaagtgttttcacgttttttgc
tttgagtgtgtgaagacacgctatgacactcgccagcgcaagtgtcccaagtgtaatgct
gcttttggcgccaatgatttccatcgcatctacattggctga
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