Arvicanthis niloticus (African grass rat): 117708473
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Entry
117708473 CDS
T08817
Symbol
Nfx1
Name
(RefSeq) transcriptional repressor NF-X1 isoform X1
KO
K12236
transcriptional repressor NF-X1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
117708473 (Nfx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117708473 (Nfx1)
04121 Ubiquitin system [BR:
anu04121
]
117708473 (Nfx1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
117708473 (Nfx1)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
117708473 (Nfx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
117708473
NCBI-ProteinID:
XP_034358021
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All DBs
Position
5:complement(102347938..102403665)
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AA seq
1113 aa
AA seq
DB search
MAEAPPVSGTFKFNTDAAEFIPQERKPGLNCGTQRRLDSNRIGRRNYSSSPPCHLPRHIP
YDDISAVHQHSYASGSKPKGPQGFFQSSNKSHKNHGLQNQPWQKLRNERHQNRTRKAQGL
TEQTSDTSSLESVARSESGTNPREHSPSESEKEVVIADPRGAKPKKAAQLTYNYGRGPKA
KGRLRSEWGNRMSPKSEDENSRPVPISHTDSSDASCRKPVVDPCVCRRNEQRRYPQKRPP
WEVEGARPRPGRNPPKQESQRHINAGPKTNMSPIPKDSLRERPTKSACDTGNLAVVNKSS
RRVDQEKHAVRRQDPQVLSAFPRGKQNHMLKNVETHTGSLIEQLTTEKYECMVCCELVQV
TAPVWSCQSCFHVFHLNCIKKWARSPASHADGQSGWRCPACQNVSAHVPNTYTCFCGKVK
NPEWSRNEIPHSCGEVCRKKQPGQDCPHSCNLLCHPGPCPPCPAFTTKTCECGRTRHTVR
CGQPVSVHCSNACENILNCGQHHCAELCHGGQCQPCRIILNQVCYCGSTSRDVLCGTDVG
KSDGFGDFSCLKICGKDLKCGSHTCSQVCHPQPCQPCPRLPHLVRYCPCGQTPLSQLLEH
GSNGRKTCMDPVPSCGKVCGKPLSCGSSDFIHTCEKLCHEGDCGPCSRTSVISCRCSFRT
KELPCTSLKSEDATFMCDKRCNKKRLCGRHKCNEICCVDKEHKCPLICGRKLRCGLHRCE
EPCHRGNCQTCWQASFDELTCHCGASVIYPPVPCGTRPPECTQTCARIHDCDHPVYHSCH
SEEKCPPCTFLTQKWCMGKHELRSNIPCHLVDISCGLPCNAMLPCGMHKCQRLCHKGECL
VDEACKQPCTTPRVDCGHPCMAPCHPSLPCPVTACKAKVELQCECGRRKEMVICSEASGT
YQRIAAISMASKIMDMQLGDSVEISKFITKKEVQQARLQCDEECAALERKKRLAEAFDIT
DDSDPFNVRSSASKFSDSLKEDARKDFKFVSDVEKEMEALVEAVDKGKNNKKSYCFRPMN
RDHRRIIHDLAQVYGLESVSYDSEPKRNVVVTAIRGKSVCPPTTLTSVIERETQTRPPPP
IPHHRHQADKNPGSSNLQRMTKEPVIDYFDVQD
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgcctccggtctcaggcacttttaaattcaatacagatgctgctgagttc
attcctcaggagagaaaacctggtctaaattgtgggacccaaagaagactagattctaat
aggattggcagaagaaattatagttcctcgcctccctgtcaccttcctagacacatccct
tatgatgacatctctgctgttcatcagcacagttatgcctctggaagcaaacctaagggt
ccacaggggtttttccagtcatctaataaatcacacaagaaccatggccttcagaatcag
ccatggcagaaattaaggaatgaaaggcaccaaaacagaaccaggaaagcacaagggctc
actgagcagacgtcagatacatcgagtttagaaagtgtagccaggtcagagagtggaaca
aaccctagagaacacagcccttctgagagtgagaaggaggtggttattgcagatcccagg
ggagcgaaacccaaaaaagcagcacagcttacatacaactatggcagaggaccaaaggcc
aaagggagactcagaagtgagtggggtaatagaatgagcccaaagtctgaggacgaaaat
agcagacctgtgccgatttcccacactgactcttcagatgcctcctgcagaaaacctgta
gtggatccatgtgtgtgcagacggaatgagcagagaagatatccccagaaaaggcctccc
tgggaagtggagggggccagaccacggccaggaaggaacccaccaaaacaggagagtcag
cggcatataaatgcagggcccaaaaccaacatgtcccccattccaaaggatagtctcaga
gaaagaccaacgaaatcagcctgtgacactggaaatttggcagttgtcaacaagtcttcc
agaagggttgaccaagagaaacatgctgtaaggagacaggaccctcaagtgctgtctgct
tttcccagaggcaaacagaaccatatgctgaagaacgtggaaacacacactggttccctg
attgagcagctaactacagaaaaatacgagtgtatggtgtgctgtgagttggtccaggtc
acagcccccgtgtggagctgtcagagttgctttcatgtctttcatttgaactgcatcaag
aaatgggcacggtctccagcatcacatgcagatggccagagtggttggaggtgtcctgcc
tgtcagaatgtttctgcacatgttcctaatacctacacttgtttctgtggcaaggtaaag
aatcctgaatggagcagaaatgaaatcccacatagttgtggtgaggtttgtagaaagaaa
caacctggccaggactgtccacattcctgtaaccttctctgccatcctggaccctgccca
ccctgccctgcttttacaactaaaacatgtgaatgtggacggaccaggcacacggttcgc
tgtggtcagcctgtctcagtccactgttctaatgcgtgtgagaatattttgaactgtggt
cagcaccactgtgctgagctgtgccatgggggtcagtgccagccttgccggatcatactg
aaccaggtgtgctactgtggcagcacctcccgagatgtcctgtgtggaactgatgtgggc
aagtctgacggattcggggacttcagctgtttaaagatatgtggcaaggacttgaagtgt
gggagtcacacctgttctcaggtttgccatcctcagccctgtcagccttgcccacggctc
ccccacttggtgagatactgcccttgtggccaaacacctctcagccagttgctggaacat
ggaagtaatggtcggaaaacatgcatggatcctgtcccttcctgtggaaaagtgtgtggc
aaacccttatcctgtggttcctcagatttcatccacacctgtgaaaagctctgccatgaa
ggagactgtgggccgtgctctcgcacctcagttatctcctgcagatgttctttcagaaca
aaggagcttccatgtaccagtcttaaaagtgaagatgctacatttatgtgcgacaagcgg
tgtaacaagaaaagattgtgtggacggcataaatgtaacgagatctgctgtgtggacaaa
gagcacaagtgtcctttgatttgtggaaggaagctccgctgtggccttcatcggtgtgaa
gaaccttgtcatcgagggaactgtcagacctgctggcaagccagctttgatgaattaact
tgccactgtggtgcctctgtgatctacccaccagttccctgtgggactaggcctcccgag
tgtacacagacctgtgccaggatccatgattgtgaccatccagtatatcattcttgtcat
agtgaggagaagtgtcccccttgtactttcctaactcagaagtggtgcatgggcaagcat
gagttacgaagcaacatcccctgtcatctggttgatatctcttgcggattgccctgcaat
gccatgctaccctgtgggatgcacaaatgtcaaagactctgtcacaaaggagaatgtctt
gtggatgaggcctgcaagcagccctgtaccacacccagagttgactgtggccacccatgt
atggcaccctgtcaccccagtttaccctgccctgtgacagcttgtaaagccaaggtagag
ttacagtgcgaatgtgggagaagaaaggagatggtgatttgctctgaagcatctgggact
tatcaaagaatagctgctatttctatggcctctaaaataatggacatgcagcttggagac
tcagtggagattagcaagttcattaccaagaaggaagtccagcaagccaggttgcagtgt
gatgaggagtgtgctgcgctggaaaggaaaaagagattggcagaggccttcgacatcact
gacgattctgatcctttcaatgtacgttcttcagcatcgaaattcagtgacagcttaaaa
gaggatgccaggaaagacttcaagtttgtcagtgatgttgagaaggaaatggaagcactc
gtggaggctgtggacaagggaaagaataataagaaaagctactgcttccgtcccatgaac
agagaccaccgccgaatcatccatgacctggcccaagtgtatggcctggagagtgtgagc
tacgacagtgagccaaagcgcaacgtcgtggtcaccgccatcagagggaagtccgtttgt
cctcctactacgctgaccagtgtgattgaaagggagacacagacacggcctccaccacca
atccctcatcaccgacaccaggcagacaagaatcctgggagcagtaatttacagaggatg
acgaaagagccagtgattgactactttgatgtccaggactga
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