Arvicanthis niloticus (African grass rat): 117708475
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Entry
117708475 CDS
T08817
Symbol
Rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117708475 (Rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anu03400
]
117708475 (Rad54l)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
117708475 (Rad54l)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
117708475
NCBI-ProteinID:
XP_034358025
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Position
5:37030664..37061165
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AA seq
747 aa
AA seq
DB search
MRRSLAPSQLARRKPEDRSSDDEDWQPRTVTPKKRKSSNETQVQECFLSPFRKPLTQLLN
RPPCLDSSQHEAFIRSILSKPFKVPIPNYQGPLGSRALGLKRAGVRRALHDPLEEGALVL
YEPPPLSVHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCI
MADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQP
LAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLKKGNVGLVICDEGHR
LKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELP
ILKSRDAAASEADRQLGEERLRELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQ
TELYKRFLRQAKPEEELREGKMSVSSLSSITSLKKLCNHPALIYDKCVAEEDGFEGALGI
FPPGYNSKAVEPQLSGKMLVLDYILAMTRSRSSDKVVLVSNYTQTLDLFEKLCRVRRYLY
VRLDGTMSIKKRAKVVERFNNPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND
EQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE
LKELFTLDEASLSDTHDRLHCRRCVNSRQVWPPPDGSDCTSDLAQWNHSTDKRGLQDEVL
QAAWDASSTAITFVFHQRSHEEQRGLH
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggagcttagctcccagccagttggccaggaggaaaccagaggacagatcatct
gatgatgaagactggcagcctaggacagtaactcctaagaaacgaaaatccagtaatgag
acccaggtccaggagtgtttcctgtctccttttcggaagcccttgactcagttactcaac
cgaccgccttgtctggatagcagtcaacatgaagcatttattcgaagtattttgtcaaag
cctttcaaggtccccattccaaattatcaaggtcccctgggctctcgtgcattgggcctg
aaaagggctggagttcgtcgtgcccttcatgaccctctggaagaaggtgccttggttctc
tatgagccacccccactaagcgtccatgaccaactgaagcttgacaaggaaaaactccct
gttcatgtagttgttgatcctattctcagtaaggtgttgcggcctcatcagagagagggg
gtgaagttcctatgggagtgtgtcaccagtcgtcgaattcctggaagccacggctgcatc
atggccgacgagatgggcctgggaaagacactacagtgcatcacactgatgtggacactt
ttacgccagagcccagagtgcaagccagaaatcgagaaagcagtggtggtgtcaccttcc
agcctggtgaagaactggtacaatgaggttgagaaatggcttggagggaggatccaacct
ctggccattgatggtggctcgaaggacgagatagaccaaaaactggaaggattcatgaac
cagcgtggagctagagtgccttcccccatcctcatcatttcctatgagactttccgcctg
catgttggagttcttaaaaaaggaaatgttggactggtcatatgtgacgagggccacagg
ctaaagaactctgagaatcagacttatcaggctctggacagcttgaataccagccggcgg
gttctcatctctggtacccccatccaaaatgatttgcttgaatatttcagcttggtgcac
tttgttaattcaggcattttgggaactgcccatgaattcaagaagcattttgagttgcca
attttgaagagtcgagatgcagctgccagtgaggcagataggcagcttggtgaggaacgt
ttgcgggagctcatcagtattgtgaataggtgcctgatacggagaacatctgatatcctc
tctaagtatctgccagtgaagattgagcaggtggtttgttgtaggctgacacctcttcaa
actgagttatacaagagatttctgagacaggctaagcctgaagaagaattgcgtgagggc
aagatgagtgtgtcttccttgtcttctatcacctctctaaagaagctgtgtaatcatcca
gctctaatctatgacaagtgtgtggcagaggaggatggctttgaaggcgctttgggtatc
ttcccacctggttataattctaaagctgtagagccacagttgtcaggtaagatgctggtc
cttgactacattctggccatgactcgaagccgtagcagtgacaaagtcgtgctggtgtct
aattatactcagacattggatctctttgaaaagctgtgccgggttcgaaggtacttgtat
gttcgcctggatggcacgatgtccattaagaagcgagccaaggttgtggagcgcttcaat
aacccatcaagccctgattttgttttcatgctgagcagcaaagctgggggctgtggtctt
aacctcattggtgctaaccggctggtcatgtttgatcctgactggaatccagccaatgat
gaacaagctatggcccgagtctggcgtgatggtcaaaagaagatctgctatatctaccga
ctgctatctgcaggaacaattgaggagaagatctttcagaggcagagccacaagaaggct
ctaagcagctgtgtggtagatgaagagcaggatgtggagcgccacttctctcttggtgag
ctcaaagagctgtttacccttgatgaagccagcctcagtgacacacatgacagactgcat
tgccgccgttgtgtaaacagccgccaggtctggccaccccctgatggttctgactgcact
tcagacctggctcagtggaaccacagtacagataaacgagggctccaggatgaggtactc
caagctgcctgggatgcttcatctacagccatcaccttcgtcttccaccagcgttctcat
gaggagcagcggggtcttcactga
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