KEGG   Arvicanthis niloticus (African grass rat): 117708479
Entry
117708479         CDS       T08817                                 
Symbol
Kdm4a
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
anu  Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:anu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:anu03036]
    117708479 (Kdm4a)
Enzymes [BR:anu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     117708479 (Kdm4a)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     117708479 (Kdm4a)
Chromosome and associated proteins [BR:anu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117708479 (Kdm4a)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD DUF7141 Tudor_5 53-BP1_Tudor LBR_tudor DUF4537 PHDvar_NSD
Other DBs
NCBI-GeneID: 117708479
NCBI-ProteinID: XP_034358030
LinkDB
Position
5:35029431..35077211
AA seq 1063 aa
MASESETLNPSARIMTFHPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWRPRTSYD
DIDDLVIPAPIQQLVTGQSGLFTQYNIQKKAMTVREFRKIANSDKYCTPRYSEFEELERK
YWKNLTFNPPIYGADVNGTLYEQHVDEWNIGRLKTILDLVEKESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG
KQAVLCSCRKDMVKISMDVFVRRFQPERYKLWKAGKDSTVIDHTLPTPEAAEFLKDSGLT
PRAGNEECPEEDTDDAEQGEEGDVKRSLAKHRIGTKRHRVCLEIPQEVSQSELFPKEELS
SGQYEMTECQATLAPVRPTHSSVRQVEDSLPFPDYSDPTEVKFEELKNVKLEDEGEEDEP
EAAALDLSVNPASVGGRLIFAGSKKKSSSSLGSSSSQDSVSSDSETTESVSCQGQEKTGV
LTVHSYARGDGVAATGEPSVKKKRSAPRSISEQELAEVADEYMLSLEENKKTKGRRQPLS
KLPRHHPLVLQECGSDDETSEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEFNEIM
AQQAPHCAVCMIFQTYHQVEFGSFSQSCGNASESAAQTQRTKPLIPEMCFTTTGCSTDIN
LSTPYLEEDGTSMLVSCKKCSVRVHASCYGVPPAKASEEWMCSRCSANALEEDCCLCSLR
GGALQRANDDRWVHVSCAVAILEARFVNIAERSPVDVSKIPLPRFKLRCVFCKKRRKRNA
GCCVQCSHGRCPTAFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPNLERAKGALLSITA
GQKVISKHKNGRFYQCEVVRLTTETFYEVNFDDGSFSDNLYPEDIVSQDCLQLGPPAEGE
VVQVRWTDGQVYGAKFVASHPIQMYQVEFEDGSQLVVKRDDVYTLDEELPKRVKSRLSVA
SDMRFNEIFTEKEVKQEKKRQRVINSRYREDYIEPALYRAIME
NT seq 3192 nt   +upstreamnt  +downstreamnt
atggcttctgaatcagaaacgttgaaccccagcgctcggatcatgacctttcaccccacc
atggaagagttccggaacttcagccgctacattgcctacattgaatctcaaggggctcac
cgggctgggctagccaaggttgttcctcccaaagagtggagacctcgaacatcttacgac
gatattgatgacctggtcatccctgcacccatccagcagctggtgacgggtcagtctggc
ctcttcactcagtacaacatacagaagaaagccatgactgtccgggagttccgcaagatc
gccaatagtgacaagtactgtaccccacgatacagtgaatttgaagaacttgagcgtaaa
tactggaaaaacctcacattcaatcctcccatctatggagcagatgtgaatggtactctc
tatgaacagcatgttgatgagtggaatattggccggctgaagaccatcctggacctggtg
gaaaaggagagtgggatcaccatcgagggtgtgaacaccccctacctgtacttcggcatg
tggaagacatccttcgcctggcacacagaggacatggatctgtacagcatcaactacctg
cactttggagagccaaagtcttggtactctgtcccacctgaacatgggaaacgcctggag
cgtcttgccaaaggctttttcccagggagtgctcaaagctgtgaggcttttcttcgccac
aagatgacccttatctccccattaatgctgaagaagtatggcattccctttgacaaggtg
acccaagaagcaggagagtttatgatcacttttccatatggttaccatgctggtttcaac
catggcttcaactgtgcagagtctaccaattttgctacccgtcggtggattgagtatggc
aagcaagctgtactgtgctcctgcagaaaagatatggtaaagatctccatggatgtgttt
gtgaggcggttccagccggaacgctacaaactatggaaagccgggaaggacagcacggtt
attgaccacactctgcccacaccggaagcagccgagtttctgaaggacagcggactaacc
ccgagagctgggaatgaggagtgcccggaggaggacacagacgatgctgagcagggagag
gagggcgatgtgaagagaagtctggccaagcaccgaatagggacaaagagacaccgggtc
tgtctggaaataccacaggaggtcagtcagagcgagctcttccccaaggaagagctgagt
tctggacagtatgagatgacagagtgccaggccaccctcgccccagtgaggcccacccac
agctctgtgcggcaagttgaggacagcctccccttcccagattattctgaccccactgaa
gtcaaatttgaagagctgaagaatgtcaaactcgaagacgagggtgaggaggacgagccc
gaagcagctgcactggacctttctgtgaatcctgcgtccgtaggaggacgcctcatcttc
gcgggttccaaaaagaaatcctcttccagcctgggctccagttcatctcaggattcagtt
tcttcagattctgaaaccaccgagtctgtctcttgccagggccaagagaaaacaggagtg
ctcaccgtgcacagctatgcaagaggggatggcgtggctgccacgggagagccgagtgtg
aagaagaaacgcagcgccccccgcagcatcagcgagcaggagctggcagaggttgcagat
gagtacatgctttccctggaggagaacaagaagaccaagggtcgccgccagcccctgagt
aagctcccacgccaccacccgctcgtgttgcaggagtgtggcagtgatgacgagacttct
gaacagctgacccccgaggaagaggctgaggagacagaggcttgggccaagcctctgagc
cagctgtggcagaaccgacccccgaactttgaggccgaaaaggaattcaatgagatcatg
gcccaacaggcccctcactgtgctgtgtgtatgatcttccagacctaccatcaggtggaa
tttggaagcttcagtcagagctgtgggaatgcttcagaatcagctgcccagactcagagg
accaaaccgttgatccctgaaatgtgctttaccacaactggctgcagcacagacataaat
ctgtccaccccttacctagaggaggatggcaccagcatgctagtgtcctgcaagaagtgc
agtgtccgggtccacgccagctgctatggtgtcccccctgcaaaggcttctgaagaatgg
atgtgctctcgatgttcagccaatgccctggaggaagactgctgtttatgctcattgcgt
ggaggggccctgcagagagccaacgatgacagatgggttcatgtttcatgtgctgtggca
attctagaagcaaggtttgtcaacattgctgaaagaagtccagtggatgtgagcaaaatc
cctctgccccgcttcaaactgaggtgtgtcttttgtaagaagcggaggaaacggaacgct
ggctgttgtgtgcagtgctctcatggccgctgccccaccgccttccacgtgagttgtgcc
caggctgctggggtgatgatgcaacctgacgactggccctttgttgtcttcatcacgtgc
ttccgacacaagattcccaatctggagcgcgctaaaggagccctgttgagcatcacggct
ggccagaaggtcattagcaagcataagaatggccgattctaccagtgcgaggtggtcaga
cttaccactgagaccttctatgaagtcaactttgatgacggctccttcagcgacaacctt
tatcctgaggacatagtgagtcaggactgtctccaactgggtcctcctgctgaaggcgaa
gtggttcaagtcagatggacagatggtcaagtctatggggctaagtttgtggcctcccac
cccatccagatgtaccaggtggagtttgaggatggctcgcagctggtggttaagagagat
gatgtgtacacactggatgaagagcttcccaagagagtcaagtctagactgtcagtagct
tcagacatgcggttcaatgagattttcacggagaaggaagtaaagcaagaaaagaaaagg
caacgggtcatcaactcgaggtaccgggaggattacatcgagccagcactgtaccgggcc
atcatggagtag

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