Arvicanthis niloticus (African grass rat): 117708482
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Entry
117708482 CDS
T08817
Symbol
Trim3
Name
(RefSeq) tripartite motif-containing protein 3 isoform X1
KO
K11997
tripartite motif-containing protein 2/3
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117708482 (Trim3)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117708482 (Trim3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
SGL
zf-B_box
zf-C3HC4
zf-RING_UBOX
TEN_NHL
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-C3HC4_2
Invasin_D3
RING_XB3-XBAT31
Beta-prop_IFT122_1st
Mala_s_1-like
zf-ANAPC11
FTR1_4HB
CENP-F_leu_zip
Vgb_lyase
Motif
Other DBs
NCBI-GeneID:
117708482
NCBI-ProteinID:
XP_034358044
LinkDB
All DBs
Position
1:complement(74468334..74491573)
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AA seq
750 aa
AA seq
DB search
MAKREDSPGPEVQPMDKQFLVCSICLDRYRCPKVLPCLHTFCERCLQNYIPPQSLTLSCP
VCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSAVAGRPLSCPNHEG
KEPLYHQTMEFYCEACETAMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLP
QLSAAIALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLESICGAKQKVL
QTQLDTLRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENA
QLELVLEVDGLRRSVLNLGALLTTSATAHETVATGEGLRQALVGQPASLTVTTKDKDGRL
VRTGSAELCAEITGPDGVRLTVPVVDHKNGTYELVYTARTEGDLLLSVLLYGQPVRGSPF
RVRALRPGDLPPSPDDVKRRVKSPGGPGSHVRQKAVRRPSSMYSTGGKRKDNPIEDELVF
RVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQ
RPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMGPKGVAVDRNGHIIVVDN
KSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGE
FLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLY
GPQGLALTSDGHVVVADAGNHCFKAYRYLQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggctaagagggaagacagccctggcccggaggtgcagccaatggacaagcagtttctg
gtgtgcagtatctgcctggatcgataccggtgccccaaagttctgccttgtctacatacc
ttctgcgaaagatgcctccagaactacatccctcctcagagcctgacactgtcctgtcca
gtgtgccggcagacatcgatcctcccagaacagggtgtctcagccctacaaaacaacttc
ttcatcagcagcctcatggaggccatgcagcaggcacctgatggggcccacgaccctgaa
gacccccaccccctcagcgcagtggctggtcgccctctctcctgccccaaccatgaaggc
aaggagcccttgtaccaccagacgatggagttttactgtgaggcctgtgagaccgccatg
tgtggtgagtgccgcgcaggggagcaccgtgaacatggtacagtgctgttgcgggacgtg
gtggagcagcacaaggcagctctgcagcgccagcttgaagctgtgcgtggccgattgcca
cagctgtctgcagctatcgccttggttgggggcatcagccagcagctgcaagagcgcaag
gcagaggccctggcccagataagtgcagcctttgaggacctggagcaagctctgcagcag
cgcaagcaggctctggtcagcgacttggagagcatttgtggggccaagcagaaggtgttg
cagacacagttagacacactgcgccagggtcaggaacacattggcagtagctgcagcttt
gcagagcaggcactgagactgggctctgcccctgaggttttgctagtaagaaagcacatg
cgagagaggctggctgctctggcagctcaggccttcccagaaaggccacatgagaatgca
cagctggaactggtccttgaagtagatgggttgcggagatcggtgctcaatctgggtgca
ctgctcaccaccagtgctacagcacacgagacagtggccacaggtgagggcctgcgccag
gcactggttggccagcctgcttcactcactgtcaccaccaaagacaaagatgggcggctg
gtgcgcacaggcagtgcagagctgtgtgcagagatcactggccccgatggtgtgcgcctt
acagtaccggtggtggaccacaaaaatggcacgtatgagctggtgtacactgcacgcaca
gaaggtgacctgctcctctcagtgctgctctatggacagccagtgcgtggcagccctttc
cgtgtgcgtgccctgcgaccgggagacctgccaccttcaccagatgatgtgaagcgccgg
gtcaagtctcctggtggtcctggcagtcatgtgcgccagaaggcagtgcgtaggccgagc
tccatgtacagcactggtggcaaacggaaggacaatccaattgaggatgaactcgtcttt
cgtgttggcagtcgtggaagggagaagggtgaattcaccaatttacaaggtgtgtccgct
gccagcagtggccgcatagtagtagcagatagcaacaaccagtgtattcaggttttctcc
aatgagggccagttcaagttccgatttggggtccgtgggcgctcacctgggcaactacag
cgtcctacgggtgtggcagtggacaccaatggagacattattgtggcagactatgacaac
cgttgggtcagcatcttctctcctgagggcaagttcaagaccaagattggagctggccgc
ctcatgggacccaagggagtggctgtggaccggaatggacatatcattgtggtggataac
aaatcatgctgtgtcttcaccttccagcccaatggcaagcttgttgggcgttttggaggc
cgtggggccactgaccgccactttgcagggccccactttgtggctgtgaacaacaagaat
gagattgtagtaacggatttccataaccattcagtgaaggtgtacagtgctgatggagag
ttcctcttcaaatttggctcgcatggcgagggcaatggacagttcaatgcccccacggga
gtagctgtggactccaatgggaacatcatcgtggccgactggggcaacagccgcatacag
gtattcgacagctctggttccttcctgtcctatatcaacacatctgcagagccactgtat
ggcccacagggcttggcattgacctcggatggccacgtggtagtagctgatgctggcaac
cactgctttaaggcctatcgatacctccagtag
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