KEGG   Arvicanthis niloticus (African grass rat): 117708511
Entry
117708511         CDS       T08817                                 
Symbol
Kdm4c
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
anu  Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:anu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:anu03036]
    117708511 (Kdm4c)
Enzymes [BR:anu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     117708511 (Kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     117708511 (Kdm4c)
Chromosome and associated proteins [BR:anu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117708511 (Kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_5 DUF7141 LBR_tudor SLX1_C SH3_Hsr9
Other DBs
NCBI-GeneID: 117708511
NCBI-ProteinID: XP_034358119
LinkDB
Position
5:complement(74403148..74564244)
AA seq 1051 aa
MEVAEEVESPPNPSCKIMTFRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQ
CYDDIDNLLIPAPIQQMVTGQSGLFTQYNIQKKAMTVKEFRQLANSSKYCTPRYLDYEDL
ERKYWKNLTFVAPIYGADINGSIYDEGVDEWNIARLNTVLDVVEEECGISIEGVNTPYLY
FGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAF
LRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWI
DYGKVAKLCTCRNDMVKISMDIFVKKFQPDRYQIWKQGKDIYTIDHTKPTPESTPEVKTW
LQRRKKLRKAPRSFQGNKPLSKRPKTEEDEEIAEFSGEEVSNPAVCPGHLMVIEKPEKPF
KPGNREASLGKEASDTRMQIDQSLLNDTKLSGKSCINSSITDEIQPEDDTANAVISPSML
KEVSDLKPFSHGHITGKESHLQLESPKISSSLAESNRVLTQGEETDEEGHGSNVEPGKIP
KTLNEERNGLNIPKIIEGQPKTTKSWRHPLGKPPARSPMTLVKQQVVSDEELPEVLSIDE
EVEETESWAKPLIHLWQTKSPNFMAEQEYNATVAKMEPNCAICTLLMPYYKPENSKEEND
SRWETAVNEVVQSGRKTKPIIPEMCFIYSEENVEYSPPNAFLEEDGTSLLISCAKCFVRV
HASCYGVPSHDVCDGWLCARCKRNAWTAECCLCNLRGGALKQTKNNQWAHVICAVAVPEV
RFTNVPERTQIDVDRIPLQRLKLKCIFCRQRVKRISGACIQCSYGRCPASFHVTCAHAAG
VLMEPDDWPYVVNITCFRHRINSNVKSKTCEKAISVGQTVITKHRNTRYYSCRVIDVTSQ
TFYEVMFDDGSFSRDTFPEDIVSRNCVKLGPPAEGEVIQVKWPDGKLYGAKYLGSNVAYM
YQVEFEDGSQIAMKREDIYTLDEELPKRVKARFSTASDMRFEDTFYGADVIQGERKRQRV
LSSRLKNEYVDDPVYRTFLKSSFQKKCQKRQ
NT seq 3156 nt   +upstreamnt  +downstreamnt
atggaggtggcggaggaggtggagagtcccccaaatcccagctgtaagataatgaccttc
agaccttccatggaggagtttcgggagttcaacaaatacctcgcatacatggaatctaaa
ggagcccaccgagcaggtcttgccaaggtgattcctcctaaggagtggaagccaagacaa
tgctatgatgatattgataatttgcttatcccagcaccaattcagcagatggtcacaggg
cagtcgggactgtttactcaatacaacatccagaaaaaagccatgactgtaaaggagttc
aggcagctggccaacagtagcaaatactgtactccaagatatttggattatgaagatttg
gaacgcaaatactggaaaaacttaacttttgtggcacctatttatggagctgatataaat
gggagcatatatgatgagggcgtggatgaatggaatatagctcgcctaaatacagtcttg
gatgtggttgaagaagagtgcggtatttctattgagggtgtaaataccccttacctctat
tttggaatgtggaaaacaacatttgcatggcacactgaggacatggatctctacagtatt
aattatctccactttggggagcccaagtcttggtatgctatacctccagagcatggaaag
cgacttgaaagactagcccaaggctttttccccagcagctcccaaggctgtgacgcattt
ctccgccacaagatgacgctgatttccccctcggtgctgaagaagtacggcattcccttt
gacaagatcacccaggaggctggagaatttatgatcacttttccttatggatatcatgct
ggttttaatcatgggttcaattgtgctgaatctacaaattttgctactgtcagatggatt
gactatggaaaggttgctaaattgtgcacttgtcggaatgacatggtgaagatatcaatg
gatatatttgtgaagaaatttcagccagatagataccagatttggaaacaaggaaaggat
atatatactattgaccatacaaagcccactccagaatctaccccagaagtaaaaacatgg
ctacagaggaggaaaaagttaagaaaagctcccaggagctttcaggggaataagccactt
tcaaaaaggcctaaaactgaggaagatgaagaaattgcagaattcagtggggaagaggtc
tcaaaccctgctgtgtgccctgggcatctcatggtcattgaaaagccagaaaaaccattc
aagccagggaacagagaagcatctttaggaaaagaagcttctgataccaggatgcaaata
gatcaaagcttactgaatgacaccaagctctcaggaaaaagttgcataaattcatctata
acagatgaaatacaaccagaagatgacacagccaatgctgtaatttcaccatctatgctg
aaggaggtctctgacttaaaaccattttctcatggccatataacaggcaaggagtcacat
ctacagcttgaatctcccaagatatcttcctccctggcagaaagtaatagagtattgaca
cagggagaagaaactgatgaagagggccatggaagtaacgttgaacctgggaaaatccca
aaaactcttaatgaagagagaaatgggctcaatatacctaagataatagaaggacagcca
aaaactactaagagttggcgccatccacttggtaagcctccagccagatccccaatgact
cttgtgaagcagcaggtagtgagtgatgaagaattgcctgaggttctaagcattgatgaa
gaagttgaagaaacagagtcttgggcaaagcctctcatccacctttggcagacaaagtct
cctaactttatggctgaacaggagtataatgcaactgtggcaaaaatggagccaaactgt
gcaatctgcacgctgctcatgccatactacaagcctgaaaacagtaaagaagaaaatgat
tctagatgggagacagcagtaaatgaagtggttcaatctggaagaaagactaaacccatt
attccagagatgtgtttcatttatagtgaagaaaatgtagaatattcccccccaaatgcc
ttccttgaagaagatggaacaagtcttctgatatcctgtgccaagtgcttcgtgcgggtt
catgcaagttgttatggtgtcccttctcatgacgtctgtgatggatggctgtgtgcccgg
tgcaagagaaatgcatggactgcagaatgttgtctctgcaatttgagaggaggtgctctt
aaacagactaagaacaatcagtgggctcatgtcatatgtgctgttgcagttccagaagtc
cgattcactaatgtcccagaaaggacacaaatagatgtagatagaatacctttacagagg
ttaaaattgaaatgcatcttctgtagacagcgggttaaaagaatttctggagcctgcatc
cagtgttcttatggccgttgcccagcttcattccatgttacgtgtgcccatgctgctgga
gtgctcatggagcctgatgactggccttatgtggtaaacatcacatgcttcagacataga
atcaactcaaatgtgaagtccaaaacttgtgagaaagccatttctgtgggtcagacagtc
atcacaaaacatcgaaacactcggtactacagctgcagagtgatagatgtgacatctcaa
accttttatgaggttatgtttgatgatggctccttcagcagagacacatttcctgaggat
attgtgagccgaaactgtgtgaagctgggccctcctgccgagggagaagtaatccaagtc
aaatggcccgatggtaaactttatggggcaaagtatcttggatcaaatgttgcctacatg
tatcaggttgaatttgaagatggatcccagatagcaatgaagagagaagacatatacact
ttagatgaagagttacccaagagagtaaaggctcgtttctccacagcctccgacatgcga
tttgaagacacgttttatggggcagatgtaattcaaggagagaggaagaggcaaagagtg
ctgagctccaggctcaagaatgagtatgtggatgatcctgtgtatcgtactttcctgaag
agttctttccagaagaagtgtcagaagagacaatag

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