Arvicanthis niloticus (African grass rat): 117708521
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Entry
117708521 CDS
T08817
Symbol
Tpm2
Name
(RefSeq) tropomyosin beta chain isoform X1
KO
K10374
tropomyosin 2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04260
Cardiac muscle contraction
anu04261
Adrenergic signaling in cardiomyocytes
anu04814
Motor proteins
anu04820
Cytoskeleton in muscle cells
anu05410
Hypertrophic cardiomyopathy
anu05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117708521 (Tpm2)
04820 Cytoskeleton in muscle cells
117708521 (Tpm2)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117708521 (Tpm2)
04261 Adrenergic signaling in cardiomyocytes
117708521 (Tpm2)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
117708521 (Tpm2)
05414 Dilated cardiomyopathy
117708521 (Tpm2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117708521 (Tpm2)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
117708521 (Tpm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
ERM_helical
TMF_DNA_bd
PUMA_CC
DUF3450
Snapin_Pallidin
DUF7179
ATG16
DASH_Duo1
Suppressor_APC
ADIP
XhlA
Motif
Other DBs
NCBI-GeneID:
117708521
NCBI-ProteinID:
XP_034358139
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All DBs
Position
5:100792302..100801320
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AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQALQKKLKGTEDEVEKY
SESVKDAQEKLEQAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEDSDRKYEEVARKLVILEGELERSE
ERAEVAESRARQLEEELRTMDQALKSLIASEEEYSTKEDKYEEEIKLLEEKLKEAETRAE
FAERSVAKLEKTIDDLEETLASAKEENVEIHQTLDQTLLELNNL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatcaagaagaagatgcagatgctgaaactggacaaggagaatgccatcgac
cgcgcggaacaggccgaagccgacaagaagcaagctgaagaccgatgcaagcagctggag
gaagagcagcaggccctccagaagaagctgaaggggacagaggatgaggtggaaaagtat
tccgagtctgtgaaagatgcccaggagaaactggagcaggctgagaagaaggccaccgac
gctgaagcagatgtggcctctctgaaccgccgcattcagctcgtggaggaggagttggat
cgggcacaggagcgcctggctacagccttgcaaaagctggaggaggctgagaaagcggct
gacgagagcgagagaggaatgaaggtcattgaaaaccgggccatgaaggatgaagaaaag
atggagctgcaggagatgcagctgaaggaagccaagcacatcgctgaggactcagaccgc
aaatatgaggaggtggccaggaagctggtgatcctggaaggagagctggagcgctctgaa
gagagagccgaggtggctgagagccgagccaggcagctggaggaggagcttcgaaccatg
gaccaggccctcaagtcgctgatagcctcagaggaggagtattccaccaaagaggacaaa
tacgaagaagagatcaaacttctggaggagaagctgaaggaggctgagacccgagcagag
tttgctgaaaggtctgtggcaaagttggagaaaaccattgatgacctggaagagactttg
gctagtgccaaggaagagaacgtggagattcaccagaccttggaccagacccttctggaa
ctcaacaacctgtaa
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