Arvicanthis niloticus (African grass rat): 117708536
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Entry
117708536 CDS
T08817
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
anu04040
]
117708536
Ion channels [BR:
anu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117708536
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
AAA_18
YVC1_C
HEAT_HEATR1
Motif
Other DBs
NCBI-GeneID:
117708536
NCBI-ProteinID:
XP_034358198
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Position
1:71513744..71524068
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AA seq
889 aa
AA seq
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MDPLSPQPNWTEIVNKKLKFPPTLLRAIQEGQLGLVQQLLESGSDALGAGPGGPLRNVEE
SEDRSWREALNLAIRLGHEVITDVLLANVKFDFRQIHEALLVAVDTNQPAVVRRLLARLE
REKGRKVDTKSFSLAFFDSSIDGSRFAPGVTPLTLACQKDLYEIAQLLMDQGHTIARPHP
VSCACLECSNARRYDLLKFSLSRINTYRGIASRAHLSLASEDAMLAAFQLSRELRRLARK
EPEFKPQYIALESLCQDYGFELLGMCRNQSEVTAVLNDLGEDSETEPEAEGLGQAFEEGI
PNLARLRLAVNYNQKQFVAHPICQQVLSSIWCGNLAGWRGSTTIWKLFVAFLIFLTMPFL
CIGYWLAPKSRLGRLLKIPVLKFLLHSASYLWFLIFLLGESLVMETQLSTFKGRSQSVWE
TSLHMIWVTGFLWFECKEVWIEGLRSYLLDWWNFLDVVILSLYLASFALRLLLAGLAYMH
CHDASDSTACRYFTTAERSEWRTEDPQFLAEVLFAVTSMLSFTRLAYILPAHESLGTLQI
SIGKMIDDMMRFMFILMIILTAFLCGLNNIYVPYQESEKLGNFNETFQFLFWTMFGMEEH
SVVDMPQFLVPEFVGRAMYGIFTIVMVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKL
YLSYFREGLTLPVPFNILPSPKAAFYLLRRIFRFICCGSSCCKAKKSHFPPIPTFTNPGA
RAGSGEGERVSYRLRVIKALVQRYIETARREFEETRRKDLGNRLTELTKTVSRLQSEVAS
VQKTLATGGTPRPPDGASILSRYITRVRNSFQNLGPPTSDTPAELTMPGIVETEVSLEDG
LDATGEAGTPASGKSSPSSSAHVLVHREQEAEGAEDLPLEEDLETKGES
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggatcccctatcgccacagcccaactggactgagattgtgaacaaaaagctcaaattc
ccccccacactcctgcgtgctatccaggagggccagctgggtcttgtgcaacagctgcta
gaatcgggctccgatgccttgggtgctgggccaggtggtcccctgcggaatgtggaagag
tctgaggaccgctcctggagggaagctctcaatctggctatccgcctgggccacgaggtc
atcactgatgttctgctggccaatgtcaagtttgacttccggcagatccacgaagccttg
ctagtggccgtggacacaaaccagccagcggtagtgcgtcgcctgctagctcggctggag
cgggagaaaggtcgaaaagtagacaccaagtctttctctctagccttctttgactcgtca
attgatggctcccgctttgcccctggtgtcactccactcacgctggcctgccagaaggac
ctgtatgagattgcccagctgcttatggaccagggccacacgattgctcggccccaccca
gtttcctgtgcctgcctcgagtgcagcaatgcccgcagatacgacctgctgaagttctca
ctatcccggatcaacacttaccgaggcatcgcaagccgggctcacctctcactggccagt
gaggatgccatgctggccgcctttcagctcagtcgggagctcaggcgccttgcacgaaag
gagcctgagtttaagccgcaatacatcgccctggagtctctctgccaggactatgggttt
gagttgctgggcatgtgccggaatcagagtgaggtcactgcagtgcttaatgacctgggc
gaggatagtgagactgagcctgaggctgagggcctgggccaggcctttgaggagggcatc
cccaacctggcaagactgcggttggctgtcaactacaaccagaaacagtttgtagcacac
cccatctgccagcaagttctgtcttccatctggtgtgggaacctggctggctggcgtgga
agtaccaccatctggaagctctttgttgccttcctcatcttcctcaccatgcccttcctc
tgcatcggctactggctggcgcccaagtcccggctgggccgtctgctgaagatcccagtg
ttgaagttcctgctgcattctgcctcctatctgtggttccttatcttcttgctgggagag
tctctggtcatggagactcagctgagcaccttcaaaggccgcagccagagtgtctgggag
acctcactacatatgatttgggtcacaggcttcctgtggtttgagtgtaaggaggtgtgg
atcgagggcttgcgaagctacctcctggactggtggaacttcctggacgtggtcatcctc
tccctgtacttggcatcgtttgcgctgcgcctcctcctggctgggcttgcctacatgcac
tgtcatgatgcctcggacagcaccgcctgccgctatttcaccacagctgagcgaagtgag
tggcgcacagaggatccccagttcctggccgaggtgctctttgctgtcaccagcatgctc
agcttcacccgactggcgtatattctgccagctcatgaatcgctgggcactctgcagatc
tccattggcaagatgattgacgacatgatgcggttcatgttcatcctcatgatcatcctg
acggccttcctctgtggcctcaacaacatctatgtgccctatcaggaatcggagaagcta
ggcaatttcaacgaaacgttccagtttctcttctggaccatgttcggcatggaagaacac
tcagtggtggacatgcctcagttcttggtgcctgagttcgtgggccgggccatgtatggc
atctttaccatcgtcatggtcattgtgctactcaacatgctgattgccatgatcaccaac
tccttccagaagatcgaggatgatgctgatgtggagtggaagtttgctcgctccaagctc
tacctgtcgtacttccgagagggtctgacgctgcctgtgccctttaacatcctgccgtcc
ccaaaggctgccttctacctcctcaggagaattttccggttcatttgctgtggctcctcc
tgctgcaaagccaagaagtcgcacttcccgccaatcccaacttttaccaaccctggggca
agggcggggtctggggaaggagagcgtgtgtcctaccgccttcgagtcatcaaggctctg
gtacagcgttacatagagactgcccggcgagagttcgaggagacccgtcggaaagacctg
ggcaacagactgacagagctgaccaagactgtgtctcgactgcaaagcgaggtggccagt
gtgcagaagactctggccacgggagggacaccacggcctccagatggtgccagcatcctc
agtagatacatcacccgagtgcgcaacagcttccagaacctgggcccccctacctctgac
accccagcagagctgactatgcctgggattgtggagactgaagtctctttagaagatggc
cttgatgctacaggagaggctgggactccggcttctggaaagtccagcccctcctcctct
gcccatgtgctggtacacagggagcaagaagcagagggggcagaggacttgcccctggag
gaagatctggagaccaagggcgagtcctaa
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