Arvicanthis niloticus (African grass rat): 117708545
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Entry
117708545 CDS
T08817
Symbol
Fbxo42
Name
(RefSeq) F-box only protein 42
KO
K10317
F-box protein 42
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117708545 (Fbxo42)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117708545 (Fbxo42)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_4
Kelch_5
Kelch_1
Kelch_2
Kelch_6
NANM
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
117708545
NCBI-ProteinID:
XP_034358213
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Position
5:complement(13655700..13711334)
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AA seq
717 aa
AA seq
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MASSSDSEDDSFMAVDQEETTPEGTMEQDEDPHQVLEVEEMRHNRSMSELPEEVLEYILS
FLSPYQEHKTAALVCKQWYRLIKGVAHQCYHGFMKAVQEGNIQWESRTYPYPGTPITQRF
SHSACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPSPKAGATLV
VYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVI
GDKMIVFGGSLGSRQMSNEVWVLDLEQWAWSKPNISGPSPHPRGGQSQIVIDDATILILG
GCGGPNALFKDAWLLHMHPGPWAWQPLKVENEDHGAPELWCHPACRVGQCVVVFSQAPSG
RAPLSPSLNSRPSPISATPPALVPETREYRSQSPVRSVDEAPCVNGRWGTLRPRAQRQTP
SGSREGSLSPARGDGSPILNGGNLSPGTAAVGGASLDSPVQVVSPSTPSASDGYDLKVGL
ALAPRRGSLPDQRDLRLSSIDLNWDLKSASSSSHVDSTDNRTIAGSVRHPPEQTNGAHTP
PHVASALAGAVSPGALRRSLEAIKAMSSKGPSASAALSPPLGSAPSSPGSQSLSSGETVP
IPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPLYQSMNCKPMQMYVLDIKDTKEKGRV
KWKVFTSSSVVGPPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggccagctcctcggacagtgaagatgacagtttcatggccgtggaccaagaagaaact
acaccggaagggacaatggagcaagatgaggacccccaccaagtgttggaggttgaggag
atgagacataataggtccatgtctgagctgccagaagaggttttggagtatattctgtcc
ttcctctcaccgtatcaggaacacaagactgcagccctggtctgcaaacagtggtatcgg
cttatcaaaggtgtagcccaccagtgttaccatggtttcatgaaggctgtccaggaagga
aacattcagtgggagagccggacttacccttacccggggacccccatcactcagcgcttc
tcccacagtgcgtgctattatgatgccaatcagtctatgtatgtctttgggggctgtacc
cagagcagttgcaacgccgccttcaatgacctctggaggctcgacctaaatagcaaagag
tggattcgaccgctggcctcagggtcctatccttcccccaaagctggggccactctggtc
gtgtacaaggacttgctagtgctatttggtggctggacaaggccaagtccctatccctta
caccaaccagagagattctttgatgaaattcacacgtattcaccatcaaaaaactggtgg
aactgcattgtcaccacgcacgggcctcctcccatggctggccattcctcctgtgtgata
ggtgataaaatgattgtcttcggtggctccttaggatcccggcagatgagcaatgaagtc
tgggtccttgacctggagcagtgggcgtggtccaagccgaacatctctggccccagtcct
caccccagaggtggccagtctcagattgttatagatgatgcaactatcctgatccttggt
ggctgtggcggtcccaatgctctcttcaaagatgcctggctactgcacatgcacccgggt
ccctgggcctggcagccactcaaggtagaaaacgaagaccatggagccccagaactctgg
tgtcatccagcctgccgggtgggacagtgtgtggtggtcttcagccaggcgcccagcggg
agagcacccctcagccccagtttgaactctcgcccgtcacctatcagtgccactcctcca
gccctggttcctgagacccgagagtaccgttcccagtcccccgtgaggagtgtggatgaa
gctccctgtgttaatggccgctggggaaccctgaggcccagggctcaaaggcagactccc
tcgggttcccgggaagggagcctctccccagccagaggagatggctctcccatcctcaat
ggtggaaatttgtctccagggacagcagctgttgggggtgcttccttagacagccctgta
caggtggtatctccaagcaccccgtctgcctctgatgggtacgacctaaaagtaggactg
gctctagctccccgacgagggtctttaccagatcaaagggacctgaggttaagttccatt
gatctgaattgggacctgaagtctgcttccagtagcagtcatgtggatagtacagataac
aggacaattgcagggagtgtgagacaccctccagaacagaccaatggtgctcacacccca
ccacatgtggccagtgcccttgccggggctgtatctccaggtgccctgcgtcggagtttg
gaagccatcaaagcgatgtcgtccaaaggcccctcagcctcggcagcactgagtcctcct
cttgggtctgccccaagttctcctgggagtcagagcctaagcagtggagaaacagtgccc
atcccccgtccaggaccagctcaaggagatggtcattccttaccccccattgctcgccgc
ctgggccaccaccctccacagtccctcaatgttggcaaacccttgtaccagagtatgaac
tgcaaacccatgcagatgtatgtgctggacattaaagacaccaaggagaagggccgggtc
aagtggaaagtctttaccagcagttctgtggtcggacctcctgaaaccagcctgcacaca
gtggtacagggccggggagagctcatcatatttggagggctcatggacaagaagcagaat
gtgaagtactatccaaaaacaaacgccttgtactttgtgcgagcaaagagataa
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