Arvicanthis niloticus (African grass rat): 117708840
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Entry
117708840 CDS
T08817
Symbol
Zbtb40
Name
(RefSeq) zinc finger and BTB domain-containing protein 40 isoform X1
KO
K10512
zinc finger and BTB domain-containing protein 40
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117708840 (Zbtb40)
04121 Ubiquitin system [BR:
anu04121
]
117708840 (Zbtb40)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
117708840 (Zbtb40)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
117708840 (Zbtb40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_jaz
zf-met
Zf-C2H2_ZNF451_C
zf-C2H2_PRDM15
zf-C2H2_11
zf-C2HC_2
BTB_KLHL33
zf-C2H2_6
XAF1_C
Motif
Other DBs
NCBI-GeneID:
117708840
NCBI-ProteinID:
XP_034358643
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All DBs
Position
5:17828697..17898214
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AA seq
1262 aa
AA seq
DB search
MELPNYSQQLLLQLYALCKEQRFCDCTISVGNIYFRAHKPVLAAASLLFKTLLDSTDAIS
IDASVVSPEEFALLLEMMYTGKLPVGKHNFSKIISLADSLQMFDVAVSCKNLLTNLVNCS
VQGQVVRDISVLSSEAGGKESEKPQVEVLPSEGAGEPSSSLEVSAMPAGPETAKTQEVIH
MATQEINADLPIAQEVQVAAEITGVTSHTAEVCSPSLVGQIPSEAKEADTEAECKRKQDQ
LTLLLERESVFSDADLLNPDMLRRLEGCSEIEGPQKETIMDCLKGEGGGSAFQRILDKVH
RGSLDVQVALTLMRLYQESTPAEKVSQIQPEGSTGEGKTLSVLLLEHKEDLIQCVTQLRP
IVEFLETAKEEFLPGSEKRVIQGCCEGGTPKETIENLLHRVTEEKTLPAKSLVKLLQAVR
TAFPNLGLLLDNLQKVGELPGTTGLTRVTCETEWTEEPRILCIPADHVDESSPSPGAYGA
ELLRKYQENLSEVLIDNQVLLKVISRVKSLAPGDREVMQTLVKQDSGSGGFNSLMSAALE
RRTLSATAIWQLLLAVQETETCPLNLLLEEVGREAGAGAFFRAVTAPESTVLETVLRHSK
LVQEAIQQTAGCEHLSSEEEHLAETMKEILSISSETVSPEASLRVVLSKAMEKSVSASVV
CHLLCSVHKSFPGLQPVMQELAHVGFLTKENGEERWKVTAGLHPGAEDKAEEAAKAARED
CQATEQKEQGEPGPVPEPQEKDTSASPDSAKKSFVCKACDKSFHFYCRLKVHMKRCRVAK
SKQVQSKESSETRDSEKELEKRQPDTRTEAREPDAPKKKKKRLPVTCDLCGREFAHASGM
QYHKLTEHFDEKPFSCEECGAKFAANSTLKNHLRLHTGDRPFMCKHCLMTFTQASALAYH
TKKKHSEGKMYACQYCDAVFAQSIELSRHVRTHTGDKPYVCRDCGKGFRQANGLSIHLHT
FHNIEDPYDCKKCRMSFSTLQDHRKHIHEVHSKEYHPCPTCGKIFSAPSMLERHMVTHVG
GKPFSCGICNKAYQQLSGLWYHNRTHHPDVFAAQNHRSPKFSSLQCTSCDKTFSNTIEHK
KHIKTEHADLKFHECSQCKELFPTPALLQVHVKCQHSGSQPFRCLYCAATFRFPGALQHH
VTTEHFKQSESTFPCELCGELFTSQAQLDGHLESEHPKVTGTETQAAAASHMVRVIQAPE
PAASAEQVITLEETQLAGSQVFVTLPDSQTSQNSSELVAVTVEDLLDGTVTLICGEAKIH
RV
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggaactccctaactacagccagcagctgcttctgcagctctatgccctgtgcaaggaa
cagcgattctgtgattgtaccatttccgtcggcaacatctacttcagggctcacaagcca
gtcctggcagcggccagcctcctgttcaaaaccctgctggatagcacggacgccatctcc
attgatgcatcggtggtgagccctgaagagtttgccctcttgctggaaatgatgtacact
ggcaagctacctgtgggcaagcacaacttctctaagatcatctctttagcagatagcctg
cagatgtttgacgtggctgttagttgtaaaaatcttctgaccaacctggtaaactgctct
gtccaggggcaggtggtaagggatatctcagtgctgtcctcagaggcaggtggcaaggag
tcagagaagcctcaagtagaagtccttccctctgaaggtgctggggagccctcttcctcc
ctggaagtttctgccatgccagcaggccctgagactgccaagacccaggaagtaatccac
atggctacccaagagataaatgcagaccttcccattgcccaggaggttcaggtggctgca
gagatcacaggggtgacttctcatacagctgaagtttgttccccttcccttgttggacag
atcccaagtgaggcaaaggaagcagatacagaagcagagtgcaagaggaaacaggaccaa
ctgactctcctgctagaacgcgaaagtgtcttctcagatgcagacttgctcaacccagac
atgctgagaagactggagggatgttcagagattgaagggcctcagaaggagaccataatg
gattgtctcaagggtgaaggaggaggctcagcattccagagaatactggacaaagtgcac
agagggagcctggatgtgcaggtggccctgactctcatgagactataccaggagtctaca
cctgcagagaaagtgtctcagattcagccagaagggagcacaggagagggaaagaccttg
tctgttctgttactagaacacaaagaggacctgatccagtgtgtaacacagctcagacct
attgtggagtttctggaaacagccaaggaggaattcctgccaggctccgaaaaaagggtg
attcagggctgctgtgagggtggaacacccaaggagacgatagagaatctgttgcacaga
gtgactgaagagaagaccctgcctgccaagagtctggtaaagctcctccaggctgtgagg
acagcattcccaaacctgggcctcctgctggacaatttgcagaaagtaggggagttaccc
ggcaccacaggcctgaccagagtcacctgtgaaactgaatggacagaggagcccaggata
ttgtgcattccagcagaccatgtggatgaatcctcccctagccctggtgcttacggagcc
gagctgttgagaaagtaccaggaaaacctgtctgaggttctcatagacaaccaggtgctg
ctgaaggtgatctctagggtgaagagcttagcccctggagacagagaggtcatgcagacc
ctcgtgaaacaggactctggctcaggtggcttcaattccctgatgtcagcagctctggag
aggcggactctctctgcaacagccatttggcaactgctgctagcggttcaagagactgag
acctgcccactgaatctgctcctggaggaagtaggaagggaggctggtgctggggctttc
ttccgggcagtgactgccccagagagcacggtgttggaaaccgtcctaaggcatagcaag
ctagtccaggaggccatccagcagacggcgggctgtgagcacctttcttcagaggaagag
cacctggcagagaccatgaaggagatactgagcatatcctccgagacagtgagccctgaa
gcctccctgagagtggtgctgagcaaagccatggagaaatctgtctcagcctctgtggtc
tgtcacctcctatgcagtgtccataagtctttccctggcctgcaacccgtcatgcaggag
ttggcacatgttggtttccttaccaaggaaaatggagaggagaggtggaaggtgactgct
gggcttcatcctggtgctgaggacaaagcggaggaagcagccaaggcagccagagaagac
tgccaggccacagaacaaaaggagcagggggagcctgggcctgtgccagagccacaggag
aaagacacttctgcctccccagactctgccaagaagagcttcgtctgcaaagcctgtgac
aagagcttccatttctactgccgtctaaaggtgcacatgaagcgctgccgggtggccaag
agcaagcaggtgcagagtaaggagagcagtgagaccagggactcggagaaggagctggag
aagcgccagccggacacccgcaccgaggccagagagcctgatgcccctaagaagaagaag
aagcggctgccagtgacatgtgacctctgcggaagagagtttgcccatgcctcaggcatg
cagtaccacaagctgactgagcacttcgacgagaaacctttctcctgtgaggaatgtggg
gcaaagtttgcagccaactctaccctaaagaaccacctgcgccttcacacgggggaccgt
ccattcatgtgcaagcactgcctcatgaccttcacacaggcctcagccctggcttaccac
accaagaaaaagcactcggaagggaaaatgtacgcgtgtcagtactgtgatgctgtgttt
gcccagtcgatcgagctgtcccgtcatgtgaggacccacaccggtgacaagccgtacgtc
tgtagggactgtggaaagggcttccggcaagccaacggcctctccatccacctgcacacc
ttccacaacatagaagatccttatgattgcaagaaatgcaggatgagcttctccacactg
caggatcaccggaagcacatccacgaggtgcactccaaggagtaccacccctgccccaca
tgtgggaagatcttcagcgccccctccatgctggagcggcacatggtgacccacgttgga
gggaagccctttagctgtgggatctgcaacaaggcctatcagcaattgtctgggttgtgg
taccacaatcggacgcatcacccagatgtgttcgctgctcagaaccatcggtcgcccaag
ttctcatcactgcagtgcacctcctgtgacaagaccttctccaacaccatcgaacacaag
aagcacatcaaaacagaacacgcagatctgaagttccatgagtgcagccagtgtaaggag
ctcttccccacaccagctctgctgcaggttcacgtcaagtgccagcattcagggtcacag
ccattccggtgcttgtactgtgcggccaccttccgcttccctggagccctgcagcaccat
gtcaccacagagcactttaagcagtcagagagcaccttcccctgtgagctgtgtggtgag
ctcttcacctcccaggcccagcttgatggccacttggagtctgagcacccaaaggtgaca
ggcactgagacccaggcagctgctgcctctcacatggttcgggtgatccaagctccagaa
ccagcagcctcggccgagcaggtgatcacgttggaggagacacagcttgctggttcacag
gtgtttgtgaccttgccagattcacagacctctcagaacagctccgaacttgtggcagtg
acggtggaggatttgctggatggtactgtcacgttgatctgtggtgaggccaagatccac
cgtgtctga
DBGET
integrated database retrieval system
