KEGG   Arvicanthis niloticus (African grass rat): 117708865
Entry
117708865         CDS       T08817                                 
Symbol
Plod1
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu00310  Lysine degradation
anu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:anu00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    117708865 (Plod1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:anu04147]
    117708865 (Plod1)
Enzymes [BR:anu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     117708865 (Plod1)
Exosome [BR:anu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117708865 (Plod1)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3 PRP38
Other DBs
NCBI-GeneID: 117708865
NCBI-ProteinID: XP_034358700
LinkDB
Position
5:8342917..8370231
AA seq 728 aa
MRSLLLLVPLAWLLLAQAKDDGKLEDNLLVLTVATKETEGFRRFKRSAQFFNYKIQSLGL
GEDWSLDGGPSAAGGGQKVRLLKKALTKHADKEDLVILFVDSYDVVFASGPRELLKKFQQ
AKSQVVFSAEELIYPDRRLEAKYPTVSDGKRFLGSGGFIGYAPSLSKLVAEWDGQDSDSD
QLFYTKIFLNPEKREQINISLDHRCRIFQNLDGALDEVVLKFEMGHVRARNLAYDTLPVV
IHGNGPTKLQLNYLGNYIPRFWTFETGCTVCDEGLRSLKGIGDEALPTVLVGVFIEQPTP
FLSLFFLRLLRLRYPQKQIRLFIHNQEQHHKLQVEQFLAEHGSEYQSVKLVGPEVRMANA
DARNMGADLCRQDQTCTYYFSVDADVALTEPNSLRLLIEQNKNVIAPLMTRHGRLWSNFW
GALSADGYYARSEDYVDIVQGRRVGVWNVPYISNIYLIKGSALRAELQNVDLFHYSKLDP
DMSFCANVRQQEVFMFLTNRHTFGHLLSLDNYQTTHLHNDLWEVFSNPEDWKEKYIHENY
TKALEGKLVETPCPDVYWFPIFTEAACDELVEEMEHYGQWSLGDNKDNRIQGGYENVPTI
DIHMNQITFEGEWHKFLVEYIAPMTEKLYPGYYTRAQFDLAFVVRYKPDEQPSLMPHHDA
STFTVNIALNRVGEDYEGGGCRFLRYNCSVRAPRKGWALMHPGRLTHYHEGLPTTKGTRY
IAVSFVDP
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgcggtccctgctgctcctggtcccgctggcctggcttcttttggcccaggcgaaggac
gacggcaagctggaggacaaccttttggtcctcactgtggccacaaaagagaccgagggc
ttccgccgcttcaagcgttcagcccagttcttcaactacaagatccagtcactgggcctg
ggggaggactggagcctggatggaggaccatcagcagcaggtggaggacagaaggttcgg
ctgctgaagaaggcactgacaaagcatgcagacaaggaagacctggttattctctttgtt
gatagttatgatgtcgtgtttgcctcgggaccccgcgaactcttaaagaagttccagcag
gccaagagccaggtggtcttctcagcagaggagctcatctatccggaccggaggctggag
gccaagtatcccacagtctctgatggcaagcgattcctgggctctggaggcttcattggt
tatgcccccagcctcagcaaactggtggccgagtgggatggccaggacagtgacagcgac
cagctcttttataccaagatcttcttgaacccagagaagagggagcaaatcaatatcagc
ctggaccatcgctgccgaatcttccagaacctggatggagccttggatgaagtcgtcctc
aagtttgagatgggccatgtgagagcacggaatctggcctatgacaccctcccggtggtc
atccatggcaatgggcccaccaagctgcagctgaactacctgggcaactacattcctcgc
ttctggaccttcgagacgggctgcaccgtgtgtgacgagggcctacgaagcctcaagggc
attggggatgaagctctccccactgtcctggtcggtgtgttcattgaacagccgacacca
tttctgtccttgttttttctgcggctgctgcgcctacgataccctcagaaacagatacgc
ctcttcattcacaaccaagaacagcaccacaagcttcaggtagagcagttcctggcggag
cacggcagtgagtaccagtctgtgaagctagtgggtcctgaggtgcgaatggccaacgca
gatgccaggaacatgggcgcagacctgtgtcgccaggaccaaacctgcacctactacttc
agtgtggatgctgacgtggctctgactgagccgaacagcctgcggctcctgatcgagcaa
aacaagaatgtcattgcgccactcatgacgcgccatgggaggctctggtccaacttctgg
ggggcactgagtgcagatgggtactatgcccgctcggaggactacgtggacattgtgcag
ggacgtcgtgtcggtgtctggaacgtgccttacatctcgaacatctacctgatcaagggc
agtgccctgcgggccgagttgcagaacgtcgaccttttccactacagcaagctggatccc
gacatgagtttctgcgccaatgtccgacagcaggaggtgttcatgttcctgaccaaccgg
catacctttggccacctgctgtccctggataactaccagaccacccacctgcataatgat
ctctgggaggtgttcagcaaccctgaggactggaaagagaagtacattcacgagaattac
accaaggctctggaggggaagctggtggagacgccttgtccagatgtctactggttccct
atcttcacggaggcagcctgtgatgagctggtggaagagatggaacactatggccagtgg
tctctgggtgataacaaggacaaccgtatccagggtggttatgaaaatgtgcccactatt
gacatccacatgaaccagatcaccttcgagggggagtggcacaagttcctggtggagtac
attgcccccatgacggagaagctgtaccctggctactacaccagggcccagtttgatcta
gccttcgtggtccgctataagcccgatgagcagccttccctgatgcctcaccacgatgcc
tccaccttcaccgtcaacatagccctgaacagggttggggaagattatgagggcggaggt
tgccgatttctgcgctacaactgctccgtgagagccccaaggaagggctgggccctcatg
catcctgggcggctcacacactatcacgaagggcttcccactaccaagggtacccgctac
attgctgtgtccttcgtcgatccataa

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