Arvicanthis niloticus (African grass rat): 117709019
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Entry
117709019 CDS
T08817
Symbol
Syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04120
Ubiquitin mediated proteolysis
anu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117709019 (Syvn1)
04120 Ubiquitin mediated proteolysis
117709019 (Syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117709019 (Syvn1)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117709019 (Syvn1)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117709019 (Syvn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
FAR1_N
zf-HC5HC2H
zf-C3H2C3
zf-Nse
zf-RING_Vps41
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
117709019
NCBI-ProteinID:
XP_034358965
LinkDB
All DBs
Position
1:114476120..114483210
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AA seq
612 aa
AA seq
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MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMLLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGPPPAPHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAAAPPSTSAAVSRPSGTA
TTTAAGTSTSAPASGSVPGPEAGPAPGFPFPPPWIGMPLPPPFAFPPMPVPPAGFAGLTP
EELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSVNPTEET
ASTVVSAAPSTSISSSETPTPSPGASPPIPEAEKPSAPESVGTAEEFPEDGEPDAAELRR
RRLQKLESPVAH
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggcggccagcctggcactgaccggggcagtggtggct
cacgcctactacctcaaacaccagttctaccccactgtcgtgtatttgaccaagtccagc
cccagcatggcagtcctgtacatccaggcctttgtccttgtcttcctcctgggcaaggtg
atgggcaaggtgttctttgggcagctgagggcagcagagatggagcacctactggaacgg
tcctggtatgctgtcactgagacttgtttggccttcaccgtttttcgggatgacttcagc
cctcgcttcgtggcactctttacgctccttctcttcctcaagtgtttccattggttggct
gaagaccgtgtggactttatggagcgcagccccaacatctcctggctcttccactgccgc
atcgtctctcttatgctcctcctgggtattctggacttcctcttcgtcagccacgcttat
catagcatcctgacccgtggagcctctgtgcagctggtatttggctttgagtacgccatc
ctgatgaccatggtgcttaccatcttcatcaagtacgtgcttcactccgtggacctccag
agcgaaaacccctgggacaacaaggccgtgtacatgctctacacagagctgtttacaggc
tttatcaaggtcctgctttacatggccttcatgaccatcatgatcaaggtgcacacattt
ccgctcttcgccatcaggcccatgtacctggccatgaggcagttcaagaaagctgtgaca
gatgccatcatgtctcgccgagccatccgcaacatgaacacactgtacccggatgccacc
cccgaggagctccaggcaatggataatgtctgtattatctgcagagaagaaatggtgact
ggtgctaagagattgccttgcaaccacatctttcacacgagctgcctgcgctcctggttc
cagagacagcagacctgcccaacatgccgaatggatgtcctgcgggcatcattgccagcc
cagtcaccaccacctcctgagcctgctgaccaaggaccaccccctgcccctcatccccca
ccactgctgccacagccccctaatttcccccagggcctcctgcctccttttcctccaggc
atgttcccactgtggcccccaatgggtccctttccaccggtcccacctcccccaagctca
ggagaagctgcggcccctccatccaccagcgcagctgtttctcggcccagtggaacagcc
accaccacagctgctggcaccagtacttctgccccagcgtctggctctgtacctgggcca
gaggctggtcctgcccctggctttcctttccctcctccttggataggtatgcctctgcct
ccaccttttgccttccccccaatgcctgtgccacctgcgggctttgctggcctaacccca
gaggagctgcgggcgctggagggccatgagcgacagcacctggaggcccggctacagagt
ctgcgtaacatacatacactgctggacgctgccatgctgcaaatcaaccagtacctcact
gtgctggcctccctggggccccccaggccagctacttcagtgaaccccactgaagagact
gcttctacagtggtatctgctgccccttccaccagcatctccagctctgagactcctacc
ccatccccaggagcttccccaccaattcctgaagctgaaaaaccttctgctcccgagtca
gtgggcactgcagaggagtttcctgaggatggagagcctgatgctgcagaactccgccgg
cgtcgcctacagaagttggagtcccctgttgcccactga
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