Arvicanthis niloticus (African grass rat): 117709116
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Entry
117709116 CDS
T08817
Symbol
Stx17
Name
(RefSeq) syntaxin-17
KO
K08491
syntaxin 17
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04130
SNARE interactions in vesicular transport
anu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117709116 (Stx17)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117709116 (Stx17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117709116 (Stx17)
Membrane trafficking [BR:
anu04131
]
SNARE
Syntaxin (Qa)
Stx-sER
117709116 (Stx17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
IncD
Phage_holin_3_6
ThrE
DUF6861
C19orf12
FlgN
Motif
Other DBs
NCBI-GeneID:
117709116
NCBI-ProteinID:
XP_034359129
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Position
5:complement(96202876..96250486)
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AA seq
302 aa
AA seq
DB search
MAEDEEKVKLRRLEPAIQKFTKIVIPTDLERLRKHQINIEKYQRCGVWDKLHEEHINAGR
TVQQLRSNIREMEKLCLKVHKDDLVLLKRLIDPVKEAAATATAEFLHLHLESVEELKRQV
KDEEVLLQPSLTRSTTVDGTLHTGEAEAASQSLTQIYALPEIPRDQNAAESWDTLEAGLI
ELSHLVTDMSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLQKAAKYKLAALPVAGALIG
GVVGGPIGLLAGFKVAGIAAALGGGVLGFTGGKLIQRRKQKMMEKLTSSCPDLPSQSDKK
CS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggatgaagaaaaggtgaagttacgcaggcttgaaccagccatacaaaaattc
actaagatagtgatcccaacagacctggagaggttaagaaaacaccagataaacatcgag
aagtatcagcggtgcggagtttgggacaagctgcatgaggaacacatcaatgccgggcgc
accgttcagcaactgcgctccaatatccgagaaatggagaagctttgcttgaaagtgcac
aaggatgatctggtcctgttgaagcgactgatagatcctgtcaaggaggcagcagcaacg
gccacagcagagtttctccacctccacttggagtctgttgaagaactcaagagacaagtc
aaggacgaagaagtgttactacagccctctctgaccagatctacaactgtcgatggaacg
ctccacactggggaggctgaagctgcttctcaaagtctgactcagatatatgccttgcct
gagattcctcgagaccaaaatgctgctgagtcctgggataccttagaagcgggcttaatt
gagcttagccatctggtcactgatatgtccctcctagtgaattctcagcaggagaagatt
gacagcattgcagaccatgtcaacagtgccgctgtgaatgttgaagagggaaccaaaaac
ttgcagaaggctgcaaaatacaagctggcagccctgcctgtggcaggtgcactcattgga
ggagtggtggggggtcccatcggcctcctcgcaggcttcaaagtggcaggaattgcagct
gcacttggtggtggggtgttaggcttcacaggtggaaaattgatacaaagaaggaaacag
aaaatgatggagaagctcacttccagctgtccagatctccctagccaaagtgacaaaaaa
tgcagttaa
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integrated database retrieval system
