Arvicanthis niloticus (African grass rat): 117709158
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Entry
117709158 CDS
T08817
Symbol
Efl1
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117709158 (Efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
anu03009
]
117709158 (Efl1)
Ribosome biogenesis [BR:
anu03009
]
Eukaryotic type
Pre-60S particles
GTPases
117709158 (Efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117709158
NCBI-ProteinID:
XP_034359199
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All DBs
Position
1:54237211..54354203
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AA seq
1133 aa
AA seq
DB search
MVLSGVDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSR
EDEQVRGITMKSSAISLHYAEGNEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKFTPQEAYSHLKNILEQINALTGTL
FTSKVLEERAERETDSQAKPHSEQGEQVYDWSAGLEDVDDSQLYFSPEQGNVVFTSAIDG
WGFGIEHFARIYSQKIGIKKEVLLKTLWGDYYINMKAKKIMKVDQVKGKKPLFVQLILEN
IWSLYDAVLKKDKEKIDKIVTSLGLKIGAREARHSDPKVQINAICSQWLPISHAVLAMVC
RKLPSPLDMTAERVEKLLCTGSQTFESLPLETQALKAAFMKCGSEDTAPVIIFVSKMFAI
DVKALPQNKPRPLTQEEMAQRRERARQRHAEKLAAAQGQAPQAPAQDGGALETSPHEDEP
RGTAFLKGDEPDMASVSRQTAPQEEGSQEAFIAFARVFSGVARRGKKIFVLGPKYSPVDF
LQRVPLGFSAPLEDLPPVPHMACCTLENLYLLMGRELEDLEEVPPGNVLGIGGLQDFVLK
SATLCSLPSCPPFIPLNFEATPIVRVAVEPKHPSEMPQLVKGMKLLNQADPCVQILIQET
GEHVLVTAGEVHLQRCLDDLRERFAKIHISVSEPIIPFRETITKPPKVDMVNEEIGRQQK
VAVIHQTKEEQSKIPEGIHVDSDGLITIPTPNKLATLSVRAIPLPEEVTRILEENSDLIR
SMELLTSSLNEGRNTQAIHQKTQEKIWEFKGKLEKHLTGRKWRNTVDQIWSFGPRKCGPN
ILVSRSEDFQNSVWSGPAGRESKEASRFRDFGNSIVSGFQLATLSGPMCEEPLMGVCFVL
EKWELNKCAEQGASDKQSQGHCDLAGEGQGEGKTCHTGDENQEQQDGCSEPFEETSQKGD
SPVIDCYGPFSGQLIATMKEACRYALQVKPQRLMAAMYTCDIMATSDVLGRVYAVLSKRE
GRVLQEEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVIPSDPFWV
PTTEEEYLHFGEKADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSRNK
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcagtggtgttgataagatgattcaacttcagaagaacactgccaacattagg
aatatatgtgttttggctcatgttgaccatggaaaaactactcttgctgattgtcttata
tccagtaatggaatcatctccagccgcctggcaggcaagttaaggtacatggacagcaga
gaagatgaacaggtcagagggatcaccatgaaatccagcgccatttcactacattatgca
gaaggtaatgaggagtacttgattaatctgatagactctcctggacatgtagacttctcc
tcagaagtatcaacagcagttcgaatctgcgatggctgcattattgtggtggatgctgtg
gagggggtctgtccacagacacaggcagttcttcgacaagcctggcttgaaaacatccgc
cctgttttagtgattaataagatagaccgcttgatagtggaactaaaattcaccccacaa
gaggcctattctcacctcaagaatattttagaacagattaacgcacttacaggaactctt
tttacttctaaagtcctagaagaaagagcagagagagagacagactcccaggcgaagcca
cattctgaacaaggagagcaagtgtatgactggagtgcaggcttggaggacgtggacgac
tcgcagctgtacttctcgccagagcagggcaatgtggtatttaccagtgccatagatggc
tggggctttggaatcgagcactttgcaagaatctatagtcaaaaaattggcatcaagaag
gaagttcttttgaaaaccttgtggggagattattacataaatatgaaggctaagaagatt
atgaaagtcgatcaggtcaaaggaaagaaacctctatttgtacagttgatcctggaaaat
atatggagtttgtatgatgcggtcttgaaaaaggacaaagaaaaaattgataaaattgtg
acttctttaggattaaaaattggagcccgggaagcacgccattcagaccctaaagtccag
atcaatgccatttgcagccaatggctccccatatcccacgctgtcctcgctatggtgtgt
cggaaactgcccagtccccttgacatgacagctgagcgagtggagaaactgttatgcaca
ggatcgcagacgtttgagtctcttccactggaaacccaagccctgaaagcagcttttatg
aaatgtggaagtgaggatactgctccagttattatctttgtttccaaaatgtttgcaatt
gatgtgaaagccttgcctcagaataagccaaggcctctcactcaagaagaaatggcccag
agacgtgaacgtgcaagacagaggcacgcagagaagcttgcagcagcacaggggcaagcc
ccccaggcacccgcccaggatggaggtgcccttgaaacaagtcctcacgaagatgagcca
agaggtacagcattcctaaaaggtgatgaaccagatatggcaagtgtaagccgtcaaact
gcaccccaggaagaaggcagccaagaggccttcattgcatttgcccgtgtgtttagtggt
gtagctcgaagaggaaagaaaatttttgtcttgggacccaagtacagccctgttgatttt
ttacagcgggttccactaggcttctcagctccactagaggacctccctcctgtgccccac
atggcatgctgtactctggagaacctgtatcttctgatgggaagggagctggaagatctg
gaggaagtccccccaggaaacgtgctgggaattggaggcctccaggactttgtgctaaaa
tctgcaactttgtgcagcctgccatcctgcccgccgtttattcccctcaactttgaagcc
acccctattgtgagagttgctgttgaaccgaaacacccaagtgaaatgcctcagcttgtg
aaaggaatgaaactgctaaaccaagctgatccctgtgtccagattttaattcaagaaaca
ggagagcatgttttagtcacagccggggaggtccaccttcagcgatgtttggatgactta
agagaaaggtttgcaaagattcacatcagtgtatctgaacccattatcccattcagagaa
acaatcacaaaacctcccaaagttgacatggtcaatgaagaaataggcaggcagcaaaaa
gttgctgtcatacaccaaacaaaagaagagcaaagcaaaatcccagaagggatccatgtg
gactctgatgggcttatcaccataccaacacccaataaactggccacactcagtgtccgt
gctataccgcttccagaggaagtcactaggatcctggaagaaaacagcgacttgattcgt
tccatggagcttttgacatcctccttgaatgagggtagaaatacccaagccattcatcag
aagacccaagagaaaatctgggagttcaaaggaaaactagagaaacacctaacagggagg
aaatggaggaacactgttgaccaaatctggtcatttggcccaagaaaatgtgggcccaac
atcctagtcagtagaagtgaagatttccagaactcggtatggtctggcccagctggcaga
gaatcaaaagaggccagcagattccgagactttggcaatagcattgtgagtggcttccag
ctagcaaccctctctggccccatgtgtgaggagcccctcatgggggtctgttttgtgcta
gaaaagtgggagctaaataaatgtgcagaacaaggagcaagtgataaacagagccagggt
cattgtgatctggcaggagagggacagggggaaggcaaaacctgtcacactggagatgaa
aaccaagagcaacaagatggctgctcagagccctttgaagagacttcccagaaaggagac
tctccagtcattgactgctatggacccttctccgggcagctgattgccaccatgaaagaa
gcgtgccgctatgctctacaggtgaaacctcaacgcctgatggcagctatgtacacatgt
gacatcatggccaccagtgatgtcctcggccgagtctatgccgtgctgtcaaagcgagaa
ggtcgggtgcttcaggaagaaatgaaggaagggacggacatgttcatcatcaaggctgtg
ctgcctgtggcggaaagcttcggctttgcagatgaaatcaggaagaggaccagcggactg
gccagcccccagctggtgttcagccactgggaggtcattcccagtgacccgttctgggtg
ccaaccaccgaggaggaatacctgcactttggagagaaggcagattctgagaaccaggcc
cggaagtacatgaatgccgtgcggaagcggaagggcctctatgtggaagaaaagatcgtg
gaacatgcagaaaagcagagaaccctcagcagaaacaagtag
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