Arvicanthis niloticus (African grass rat): 117709252
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Entry
117709252 CDS
T08817
Symbol
Nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03013
Nucleocytoplasmic transport
anu05014
Amyotrophic lateral sclerosis
anu05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117709252 (Nup98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
117709252 (Nup98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117709252 (Nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117709252 (Nup98)
03036 Chromosome and associated proteins [BR:
anu03036
]
117709252 (Nup98)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117709252 (Nup98)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117709252 (Nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
117709252
NCBI-ProteinID:
XP_034359388
LinkDB
All DBs
Position
1:complement(71545628..71632721)
Genome browser
AA seq
1816 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTSSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTAGLFGSSPATSSATGL
FSSSTTNSAFSYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTPNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQPNTGFGAV
GSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNNSGSSIF
GSKPAAGTLGTGLGTGFGTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTSTAILGFG
APQAPVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQTTGTTKSHLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLNNSNLFSPVNHDSEDLASPSEYPENGERFSFLSKPVDENHHQDGDDDSLVSRFYT
NPIAKPIPQTPESAGNKNNSSSNVEDTIVALNMRAALRNGLEGSSEETSFHDESLQDDRE
ETENNAYHIHPAGIVLTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGD
VNLTNLNLDDIVHIRRKEVIVYVDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSP
DRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEEHPPKTT
SKKLKTAPLPPAGQAPTFQMTLNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVPD
SVLEESVPEDQEPVSASTHIASSLGINPHVLQIMKASLLVDEEDVDAMDPRFGHFPSKGE
TVQEVCSPRLPISASHSSKSRSIVGGLLQSKFASGTFLSPSASVQECRTPRASSLMNVPS
TSPWSVPLPLATVFTVPSPAPEVQLKTVGIRRQPGLVPLEKSITYGKGKLLMDMALFMGR
SFRVGWGPNWTLANSGEQLHGSQELESHQVADSVEYGFLPNPVAVKSLSESPFKVHLEKL
GLRQRKLDEDLQLYQTPLELKLKHSTVHVDELCPLIVPNPGVSVIHDYADWVKESPKDLL
ELPIVKHWSLTWTLCEALWGHLKELDSQLDEPSEYIQTLERRRAFSRWLSHTAAPQIEEE
VSLTRRDSPIEAVFSYLTGSRISEACCLAQQSGDHRLALLLSQLVGSQSVRELLTMQLAD
WHQLQADSFIHDERLRIFALLAGKPVWQLSEQKQINVCSQLDWKRTLGIHLWYLLPPTAS
ISRALSMYEEAFQNTSEGDKYACSPLPSYLEGCGFTVEEEKDSRRPLQDVCFHLLKLYSD
RHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESEGL
WEWAIFVFLHIDNSSMREKAVRELLTRHCQLSETPESWAKETFLTQKLCVPAEWIHEAKA
VRAHMESNKHLEALYLFKAGHWNRCHKLVIRHLASDAIINENYDYLKGFLEDLAPPERSS
LIQDWETSGLVYLDYIRVIEMLHHIQQVDCSGYELEHLHTKVTSLCNRIEQIPCYNAKDR
LAQSDMAKRVANLLRVVLSLQHAPDATSNSTPDPQRVPLRLLAPHIGRLPMPEDYALEEL
RGLTQSYLRELTVGSQ
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttggaaccccctttgggggtggtacagggggctttggcacaacg
tcaacatttggacaaaatactggctttggtactactagtggaggagcgtttggaacatct
gcttttggttctagcaacaatactggaggcttatttggaaattcacagactaaaccagga
ggattatttggtactagttcatttagccagccagcaacctccacaagcactggttttggg
tttggcacatcaacaggaacatcaaatagtttgtttggaactgcaagtacagggaccagt
cttttctcatcccagaacaatgcatttgcacaaaataaaccaactggctttggaaatttt
ggaaccagtactagcagtggaggactctttggaactacaaataccacctctaatcctttt
ggtagcacatctggctctctctttgggccaagtagttttacagcagcacctacaggaact
accatcaaatttaatccccccactggtacagatactatggtcaaagctggagttagcact
aacatcagtaccaagcatcagtgtattactgctatgaaagaatatgaaagcaagtcatta
gaggaacttcgtttggaggattatcaggctaaccggaaaggcccacagaaccaagtggga
gcaggtaccacagctggcttatttgggtcttctccagcaacttccagtgcaacaggactc
ttcagctcctccaccactaattcagccttttcatatggtcagaacaaaactgcctttgga
actagcacaactggatttggaacaaatccaggtggtctctttggccaacagaatcaacag
actaccagtctcttcagcaaaccatttggccaggctacaaccaccccaaatactggcttt
tcctttggtaataccagtacccttggacagccaagcaccaatactatgggcttatttgga
gtaacccaagcctcacagccaggaggtctttttgggacagctacaaacaccagcactgga
acagcatttgggacaggaacaggtctctttgggcagcccaatactggatttggtgcagtt
ggttcgaccctgtttggcaataacaagcttacaacttttggaaccagcacaaccagtgct
ccttcatttggtacaaccagtggcgggctcttcggtaacaaaccaaccctgactttagga
accaatacaaacacttccaattttggttttggcacaaataacagtgggagtagtattttt
ggaagtaagccagcagccgggactctgggaactggacttggtacaggatttggaacagct
cttggtgctggacaggcatctttgtttggaaacaaccaacctaagattggagggcctctt
ggtacaggagcctttggggcccctggatttaatacttcgacagccattttgggctttggc
gccccccaggccccagtagctttgacagatccaaatgcttctgctgcccagcaggctgtt
cttcagcaacatctcaatagtctaacatactcaccctttggagactcccctctcttccgg
aatcctatgtcagatcctaagaagaaagaagagagactgaaaccaaccaatccagcagct
cagaaagctcttaccacacctactcattataaacttacacctcgtcctgccaccagagtc
aggccaaaggctttgcaaacaacaggtacaacgaaatcacatctctttgatgggctggat
gacgatgaaccatctctggccaacggagcattcatgcctaaaaagagcatcaagaagttg
gttttgaaaaatcttaacaatagcaatctcttttctcctgttaatcatgattcagaagat
ctagcttcaccctctgagtatccagaaaatggagagagatttagcttcctaagcaaacct
gttgatgagaaccatcaccaggatggagatgatgactctcttgtatcacgattttatact
aatcctattgccaaacccattccacaaactccagagagtgctggaaacaaaaacaacagt
agcagcaatgtggaagatactattgttgctttgaacatgcgtgctgctttgcgcaatgga
ctggaaggaagcagtgaagaaacatcttttcatgatgagtcattgcaagatgaccgagaa
gagacagaaaataatgcttaccatatacatccagcaggcattgttctcacaaaagttggc
tattatactatcccatctatggatgaccttgctaaaattaccaatgagaagggagaatgc
attgtttctgacttcaccattggccgtaaagggtatggctcaatctattttgaaggagat
gtgaatttgacaaatctaaatttggacgatattgtgcacatccggaggaaagaagttatt
gtctatgtagatgataaccaaaagccacctgtgggtgaagggctaaataggaaggctgaa
gttactttggatggagtttggccaacagataaaacatcccggtgtttaataaagagtcca
gatcgacttgctgatatcaactatgaggggagattagaagcagtctcaagaaagcaaggg
gcccaattcaaagagtatcggcctgaaactggttcttgggtgtttaaggtctcccatttt
tctaagtatggccttcaggattctgatgaagaggaggaggaacacccacccaaaactact
tcaaagaagctgaagactgcccctttgccccctgcaggccaggcacccactttccagatg
actcttaatggcaaacccgcacccccacctcagagccagagcccagaagtggagcagtta
ggcagggttgtggaactggacagtgacatggtagatatcacccaggagccagttccggat
tctgtgttagaagaaagtgtgcctgaggatcaggagcctgtgtctgcttcaacacatatt
gcatcttcactgggaattaatccacatgttttacagatcatgaaagcatcattgcttgtt
gatgaagaagatgtagatgccatggatccacgcttcggtcacttcccttcaaaaggagag
actgttcaggaagtctgttctcctagacttcccatttcagcctcccactcatcaaaatcc
cgctctatagttggtgggttgctgcaatcaaagtttgcaagtggaacctttctttcacca
agtgcctccgtgcaagaatgtcgcactcccagagcatcgtctctcatgaatgtcccatcc
acatccccctggtctgttcctctgcccctggccacggtgttcacagtgcccagcccggct
cctgaggttcagctaaaaacagtggggatacgcagacaaccaggcctagttcctcttgaa
aaatctattacatatggcaaggggaaactcttgatggacatggccctcttcatgggacgt
tcgtttcgggttggttggggtcccaactggactcttgctaatagtggagaacaactgcat
ggctctcaggaactggaaagtcatcaggttgctgattctgtggaatacggattcctgccc
aatccagtagctgttaaatctctatctgaatccccattcaaagttcatttggaaaaactt
ggcttgagacagaggaaactggatgaagatctgcagttataccagacacctctagagctc
aaattaaaacatagcactgtccatgtagatgagctgtgtcctctcattgtccccaatcct
ggggtttcagtcattcatgattatgcagattgggttaaggaatcacccaaagatttactg
gaactaccaattgtgaagcactggagcctgacatggacattatgtgaagccctgtggggc
cacctgaaggagcttgacagccagctggatgagcccagtgaatacattcagactctagag
cgaagaagagctttttcccgctggctgtcccatactgctgcacctcagattgaagaggaa
gtctccttaacccgcagagacagtcccatagaggctgtcttcagctacctcacaggcagt
aggattagtgaggcctgttgtctagcacagcagtcaggtgatcatcgccttgcccttctt
ttgtctcagttggtgggaagccaatcagtccgtgagctgctcaccatgcagttggccgat
tggcatcagctccaggctgactccttcatccatgatgagagattgcgcatatttgccctg
ttagctggaaaaccggtgtggcagctctcagaacagaaacaaatcaatgtatgctcccag
ctagattggaaacgaacacttggtatccatctttggtatttgcttccaccaactgcctcc
atttccagggctctcagcatgtatgaagaagcatttcagaatacttctgagggtgataaa
tatgcctgctcccctcttccctcttacctggagggctgtggctttacagtagaggaagaa
aaagactcccggagaccactgcaagatgtttgctttcatcttctgaaactctacagtgac
agacattatgatctcaatcagctattggaaccccgaagcataactgcagatcctttggac
taccgcctaagctggcacctttgggaagtgctgcgtgctcttaactatacccatctctca
gaacagtgtgagggtgtgttacaggccagttatgctggccaactggaaagtgaaggactc
tgggaatgggccatctttgtcttcctgcacattgacaactcgagcatgcgtgagaaggct
gttcgagagctgctgactcggcactgccaactgtcagagacgcctgagtcttgggctaag
gagactttccttacacagaagctttgtgtgcctgctgagtggattcatgaggccaaagca
gttcgagcacacatggaatccaataagcacttggaggccctctatttatttaaagctggt
cactggaaccgctgccacaaactagtcattcggcacctagcttctgatgccattattaat
gagaactatgactacctgaaaggattcttagaagatctggcacctccagagcgcagcagc
ctaattcaggactgggaaacatctgggctcgtttacctggattatattcgagtaattgaa
atgctccaccatatccaacaggtggattgctcaggttatgaactagagcacttacatacc
aaagtgacttcactgtgcaaccggatagagcagattccgtgttacaatgccaaggatcgc
ctggctcagtcagatatggccaagcgggtagccaacttactgcgggtagtactgagcctt
cagcatgctcctgatgccacctccaactcaactccagaccctcagcgagtccctttgcgt
cttttggctccccacattggcaggctccccatgcctgaggactatgctttggaggaactg
cgaggccttacccagtcctaccttcgagaactgactgttgggagccagtga
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integrated database retrieval system
