Arvicanthis niloticus (African grass rat): 117709490
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Entry
117709490 CDS
T08817
Symbol
Prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117709490 (Prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anu03041
]
117709490 (Prpf38a)
Spliceosome [BR:
anu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117709490 (Prpf38a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
GIP4
Motif
Other DBs
NCBI-GeneID:
117709490
NCBI-ProteinID:
XP_034359781
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All DBs
Position
5:41904250..41918391
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AA seq
312 aa
AA seq
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MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFVLMHVDEFIYELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPALRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacggtgaaggatgcccacagcatccatggcaccaaccctcagtatctg
gtggagaagatcatccggacgcggatctatgagtcaaagtactggaaagaagaatgtttt
ggacttacagctgaacttgtagtcgacaaagccatggagttaaaattcgtgggtggtgtg
tatggtggaaacataaagccaactccttttttgtgtttaaccttgaagatgcttcaaatt
caacctgagaaggatatcattgttgagttcataaaaaatgaagatttcaagtatgtccgg
atgttgggggcactttacatgaggctgacaggaactgcaattgactgctacaaatacttg
gagcctttgtacaatgactatcgaaaaatcaagagccagaaccgaaatggagagtttgta
ctgatgcatgtagatgagttcatttatgagcttctgcacagtgagagagtctgtgatatc
attttgccccggctacagaaacggtatgtgctggaagaagctgagcagctggagcctcga
gtcagtgctctagaagaagacatggatgatgtggagtctagtgaggaagaggaggaggaa
gatgagaagctggaaagagtgccatcacctgaccaccgacgaagaagctaccgagacttg
gacaagccaaggcgctcacctgcactgcgctacaggaggagccggagtcgttctcccaga
agacggagtagatcccctaaaagaagaagtccttctccccgacgagaaaggcataggagc
aagagtccacgacgccatcgaagcagatccagagacagacgacacagatcccgctctaaa
tccccaggtcaccaccgtagtcacagacatagaagccactcaaagtctcctgaaaggtct
aagaaaagccacaagaagagccggagaggaaatgagtaa
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