Arvicanthis niloticus (African grass rat): 117709535
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Entry
117709535 CDS
T08817
Symbol
Zbtb48
Name
(RefSeq) telomere zinc finger-associated protein
KO
K10519
zinc finger and BTB domain-containing protein 48
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117709535 (Zbtb48)
04121 Ubiquitin system [BR:
anu04121
]
117709535 (Zbtb48)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
117709535 (Zbtb48)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
117709535 (Zbtb48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_6
zf-C2H2_15
zf-Di19
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_11
zf-C2H2_8
Zap1_zf1
zf-C2H2_16
BTB_KLHL33
Zf-C2H2_ZNF451
zf-C2H2_ZN142
zf-C2H2_2nd_ZNF462
zf-met
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
117709535
NCBI-ProteinID:
XP_034359861
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All DBs
Position
5:4256932..4265112
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AA seq
681 aa
AA seq
DB search
MDGSFVQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGSG
GSVVLPAGFAEIFGLLLDFFYTGHLALTTGNRDQVLLAAKELRVPEAVELCQSFQPQTSV
GQAQSGLGQPASQDVKSHLKEPTDLDEEEVFRTLSLASVDQEPRDSEQPQVNTPAQSSPA
FLCGKLKQALKPSPSEDKESEDCKEPPRPFEAEGAPLQGKSNEWEVVVQVEDDRDGDYVS
EPETVLTRRKSKVIRKPCSAEPALGAGSLPAEPSESRKGAAVPVECPTCHKKFLSKYYLK
VHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRV
HMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHGAPKPHACPTCAKCFLSRTELQLHEA
FKHRGEKLFVCEECGHRASSRNGLQMHIKAKHRNERPYVCEFCSHAFTQKANLNMHLRTH
TGEKPFQCHLCGKTFRTQASLDKHNRTHTGERPFSCEFCEQRFTEKGPLLRHVASRHQEG
RPHFCQICGKTFKAVEQLRVHVRRHKGVRKFECTECGYKFTRQAHLRRHMEIHDRVENYN
PRQRKLRNLVIEDEKMVVVALQPPADLEMGSAEVIVESLTQGGLASQLPSQRLCSEESFA
SPGVLEPSLIITASVPEDCDT
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggatggttccttcgtacagcacagcgtgagggttctgcaggaactcaacaagcagcgc
gagaaaggccagtattgcgacgccacgctggacgtggggggcctggtgttcaaggcgcac
tggagtgtcctggcttgttgcagccatttcttccagagaatctacggggatggctcaggg
ggcagcgttgtcctccctgcaggttttgctgaaatctttggcctcctgctggactttttc
tacactggccacctcgccctcactacagggaacagggatcaggtgctcttggcagccaaa
gagttgcgggtgcctgaggctgtggagctatgtcagagcttccagccccaaacttcagtg
gggcaggcacagagtggactgggccagcctgcgtcccaggatgtgaaaagccacctcaag
gagccgacagacttggatgaggaggaagttttcaggactctgagcctggcctctgtggat
caggagcccagagacagcgagcagccccaggtcaacacacctgctcagagcagcccggcc
ttcctctgtgggaaactcaagcaggctttgaagccttctccctcagaggacaaagagtcc
gaggactgcaaagagcccccaaggcccttcgaggctgaaggtgccccgctgcagggcaag
agcaatgagtgggaagtggtggttcaagttgaggacgacagggacggtgattacgtatct
gagcccgagactgtgctgaccaggaggaagtcaaaagtgattagaaagccctgttcggca
gagccagccctgggtgcaggctccctcccagccgagccctccgagagcagaaagggtgca
gcagttccggtcgaatgtcccacatgtcataaaaagttcctcagcaaatactacctaaaa
gtccacaacaggaagcacactggggagaaacccttcgagtgtcccaaatgtgggaagtgt
tactttcgcaaggagaacctcttggagcatgaagccaggaattgcatgaaccgctcggaa
caggtcttcacatgctccgtctgccaggagaccttccgccggaggatggagctgcgagtg
cacatggtgtctcacacaggggagatgccctacaagtgttcctcctgctcccagcagttc
atgcagaagaaggacttgcagagccacatgatcaagctgcacggagcccctaaaccccac
gcatgccccacttgtgccaagtgcttcctgtctaggacggaattacagctgcacgaggcc
tttaagcaccgtggagaaaagctctttgtgtgtgaggaatgtggccaccgggcctcgagc
cgcaatgggctccagatgcacatcaaggccaagcacaggaatgaaaggccttatgtctgt
gagttctgcagccatgcattcacccagaaggccaatctcaacatgcacctgcgcacacac
acaggcgagaagcctttccagtgccacctctgtgggaagaccttccgcacccaagccagt
ctggacaagcacaaccgcacccacacgggtgagaggcctttcagctgtgaattctgtgag
cagcgtttcactgagaagggcccccttctgaggcatgtggccagccgccatcaagagggc
aggccccacttctgccagatctgtggcaagaccttcaaagctgtggaacagttacgagtg
cacgtcaggcgacacaaaggcgtgagaaagttcgagtgcaccgagtgtggctacaagttc
actcggcaggctcacctgcgcaggcacatggagatccatgatcgagtggagaactacaac
ccccggcagcgcaagctccggaacctcgtcattgaggacgagaagatggtggttgtggct
ctccagccacctgcagacctggagatgggctctgcagaggtcattgtagagtccctgacc
cagggtggccttgcctcccaactccctagccagagactgtgttcagaggagagctttgct
agccccggtgtcctggagccctctctcatcatcacggcatctgtccctgaggactgtgac
acgtag
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