Arvicanthis niloticus (African grass rat): 117709582
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Entry
117709582 CDS
T08817
Symbol
Matn1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
anu04990
]
117709582 (Matn1)
Domain-containing proteins not elsewhere classified [BR:
anu04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
117709582 (Matn1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
VWA_3
FXa_inhibition
cEGF
EGF_CA
EGF_LRP2
EGF
hEGF
EGF_3
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
117709582
NCBI-ProteinID:
XP_034359940
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All DBs
Position
5:complement(23792786..23802151)
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AA seq
495 aa
AA seq
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MKVTSGPAFALCSLLLLQVPDSLGLAPQSRGHLCRTRPTDLVFVVDSSRSVRPVEFEKVK
VFLSQVIESLDVGPNATRVGLVNYASTVKPEFSLRAHGSKASLLQAVRRIQPLSTGTMTG
LALQFAITKALSDAEGGRARSPDISKVVIVVTDGRPQDSVRDVSERARASGIELFAIGVG
RVDKATLRQIASEPQDEHVDYVESYNVIEKLAKKFQEAFCVVSDLCATGDHDCEQVCISS
PGSYTCACHEGFTLNSDGKTCNVCRGGGSGSATDLVFLIDGSKSVRPENFELVKKFINQI
VDTLDVSDRLAQVGLVQYSSSIRQEFPLGRFHTKKDIKTAVRNMSYMEKGTMTGAALKYL
IDNSFTVSSGARPGAQKVGIVFTDGRSQDYINDAARKAKDLGFKMFAVGVGNAVEDELRE
IASEPVADHYFYTADFKTINQIGKKLQKKICVEEDPCACESIVRFEAKVEGLLQALTRKL
EAVSKRLAVLENRIV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcacctccggtccagcctttgctctctgtagcctgctgctgctgcaggtccct
gatagcctcggtcttgccccacagtccagagggcacctctgccggacacgacccacggac
ctggtgtttgttgttgatagttctcgaagtgtgagacccgtggagtttgagaaggtgaag
gtgttcctgtctcaggtcattgagtcattggatgtggggcccaatgccacgagggtgggc
ttggtcaactacgctagcactgtgaagccagagttctcacttcgggcccacggctccaag
gcgtcgctgctgcaagctgtgcgtcgcatccagccgctgtccacaggcaccatgactggc
ctggccctgcagttcgccatcaccaaggccttgagtgatgctgaggggggacgcgccaga
tcccctgacatcagcaaggttgtcatcgtggtgactgatgggaggcctcaggacagcgtg
cgggatgtgtctgagcgcgcgagggccagtggcatcgagctgttcgccatcggcgtgggc
cgtgtggacaaggctacgctgcgacagatcgctagtgagccgcaggatgagcacgtggat
tacgtggagagctacaatgtcatcgagaagctggccaagaagttccaagaggccttctgc
gtggtgtcagacctgtgtgccacaggggaccatgattgtgagcaggtgtgcatcagctct
cctggatcctacacctgtgcctgccatgagggcttcaccctgaacagcgatggcaagact
tgtaatgtctgccgtggtggtggaagcggctcagccaccgacctggtcttcctaattgat
ggatccaagagtgtgcggccggagaactttgagctggtgaagaagtttatcaaccagatt
gtggacacactagatgtgtccgacaggctggcccaggttgggctggtacagtactcaagc
tccatacgccaggagttcccgctcggccgcttccacaccaagaaggacataaagaccgct
gtgaggaacatgtcctacatggagaagggcaccatgaccggcgccgctctgaagtacctc
atagacaattccttcactgtgtccagcggggcgaggcctggagcccagaaggtgggcatc
gtcttcaccgatggccggagccaggactacattaatgacgctgccaggaaggccaaggac
cttggctttaagatgtttgcggtgggcgtgggcaatgctgtggaggatgagctgagggaa
attgcctcggagccagtggctgaccactacttttacacggctgacttcaagaccatcaac
cagattggcaagaagttgcagaaaaaaatctgtgtggaggaagacccttgtgcttgtgag
tccatagtgagatttgaggccaaggtggagggtctgttgcaggccctgaccaggaagctg
gaagctgtaagcaagcggctggccgtcctggagaacagaatcgtctaa
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